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PLM3-1_50_b1_sep16_scaffold_1217

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1217_1

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3..740
DNA (738bp) protein (246aa)
IclR family transcriptional regulator Tax=Serinicoccus profundi RepID=UPI000255F834
Uncharacterized protein {ECO:0000313|EMBL:KGA17408.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
IclR family transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_1217_2
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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761..1975
DNA (1215bp) protein (405aa)
glycine cleavage system protein T Tax=Nocardiopsis chromatogenes RepID=UPI0003498966
Glycine cleavage system T protein (aminomethyltransferase)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AHY45912.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3-1_50_b1_sep16_scaffold_1217_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2013..2837
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Streptomyces scabies (strain 87.22) RepID=C9YXB3_STRSW
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1217_4
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3123..3446
DNA (324bp) protein (108aa)
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY01_RUBXD
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AHY45918.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3-1_50_b1_sep16_scaffold_1217_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3490..4938)
DNA (1449bp) protein (483aa)
Glycerol kinase Tax=Frankia sp. EUN1f RepID=D3D434_9ACTO
glpK; glycerol kinase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3-1_50_b1_sep16_scaffold_1217_6

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5074..6849
DNA (1776bp) protein (592aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000370EA38
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AIF04092.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_170_G02.;"
major facilitator superfamily protein
PLM3-1_50_b1_sep16_scaffold_1217_7
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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comp(6846..8576)
DNA (1731bp) protein (577aa)
Choline/Carnitine oacyltransferase superfamily protein Tax=Acanthamoeba castellanii str. Neff RepID=L8HG13_ACACA
Choline/Carnitine oacyltransferase superfamily protein {ECO:0000313|EMBL:ELR24187.1}; species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
Choline/Carnitine o-acyltransferase
PLM3-1_50_b1_sep16_scaffold_1217_8
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8650..9699)
DNA (1050bp) protein (350aa)
SpeB arginase/agmatinase/formimionoglutamate hydrolase SpeB Tax=Pseudomonas taiwanensis SJ9 RepID=V7D754_9PSED
SpeB arginase/agmatinase/formimionoglutamate hydrolase SpeB {ECO:0000313|EMBL:ESW37518.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
SpeB arginase/agmatinase/formimionoglutamate hydrolase SpeB
PLM3-1_50_b1_sep16_scaffold_1217_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9715..11523)
DNA (1809bp) protein (603aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00037ECC23
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADB49014.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1217_10
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11520..12170)
DNA (651bp) protein (217aa)
peptide ABC transporter permease Tax=Nocardiopsis alba RepID=UPI000348CE7D
N-terminal TM domain of oligopeptide transport permease C family protein
N-terminal TM domain of oligopeptide transport permease C family protein {ECO:0000313|EMBL:AFR07925.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
PLM3-1_50_b1_sep16_scaffold_1217_11
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12249..13220)
DNA (972bp) protein (324aa)
Peptide ABC transporter permease Tax=Saccharopolyspora erythraea D RepID=T2RSP9_SACER
oligopeptide/dipeptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:EQD82274.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM3-1_50_b1_sep16_scaffold_1217_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13234..13617)
DNA (384bp) protein (128aa)
Acetyltransferase Tax=Microvirga sp. WSM3557 RepID=I4YNJ2_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:EIM25534.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acetyltransferase domain protein
Displaying 12 items

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