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PLM3-1_50_b1_sep16_scaffold_1220

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1220_1
unknown

Not on your lists

comp(57..365)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1220_2
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

409..732
DNA (324bp) protein (108aa)
hypothetical protein; K09763 hypothetical protein bin=bin1_lowGC species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
PLM3-1_50_b1_sep16_scaffold_1220_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(740..1462)
DNA (723bp) protein (241aa)
Cytochrome c biogenesis protein transmembrane region Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F005_CONWI
cytochrome C biogenesis protein transmembrane region
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_50_b1_sep16_scaffold_1220_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(1467..1910)
DNA (444bp) protein (148aa)
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH bin=bin9_gal15 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin9_gal15 organism_group=GAL15
cytochrome C biogenesis protein
Tax=CSP1_3_Armatimonadetes
PLM3-1_50_b1_sep16_scaffold_1220_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1910..2467)
DNA (558bp) protein (186aa)
redoxin domain-containing protein bin=bin9_gal15 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
redoxin domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2477..3523)
DNA (1047bp) protein (349aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B34B39
ErfK/YbiS/YcfS/YnhG family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3538..4326)
DNA (789bp) protein (263aa)
Glycerophosphoryl diester phosphodiesterase Tax=Patulibacter medicamentivorans RepID=H0E7H3_9ACTN
Glycerophosphoryl diester phosphodiesterase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_8
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4323..5873)
DNA (1551bp) protein (517aa)
Spermine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F013_CONWI
spermine synthase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_1220_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5889..6137)
DNA (249bp) protein (83aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6238..6657
DNA (420bp) protein (140aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6665..6901)
DNA (237bp) protein (79aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6904..7215)
DNA (312bp) protein (104aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7212..7742)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y888_THEBD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7752..8120)
DNA (369bp) protein (123aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8200..9669)
DNA (1470bp) protein (490aa)
Pyruvate kinase Tax=Thermus oshimai JL-2 RepID=K7RES7_THEOS
pyruvate kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9623..10897)
DNA (1275bp) protein (425aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
enolase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3AB5B
eno1; enolase (2-phosphoglycerate dehydratase)
PLM3-1_50_b1_sep16_scaffold_1220_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10894..11688)
DNA (795bp) protein (265aa)
MazG family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF3_CONWI
MazG family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11698..11973)
DNA (276bp) protein (92aa)
prsA; peptidyl-prolyl isomerase (EC:5.2.1.8)
Putative peptidyl-prolyl cis-trans isomerase Tax=Clostridium sp. CAG:221 RepID=R6FR91_9CLOT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12110..12592)
DNA (483bp) protein (161aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12696..15923)
DNA (3228bp) protein (1076aa)
Transcription-repair-coupling factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF5_CONWI
transcription-repair coupling factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_21
unknown

Not on your lists

16068..16160
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1220_22
unknown

Not on your lists

16221..16313
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1220_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16381..18339)
DNA (1959bp) protein (653aa)
Adenylate/guanylate cyclase bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1220_24
unknown

Not on your lists

18432..18824
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1220_25
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19060..20127
DNA (1068bp) protein (356aa)
Hemolysin-type calcium-binding repeat family protein Tax=Lyngbya aestuarii BL J RepID=U7QGM1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETX07980.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
Displaying 25 items

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