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PLM3-1_50_b1_sep16_scaffold_1222

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1222_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2..223)
DNA (222bp) protein (74aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
succinyl-CoA synthetase subunit beta Tax=Actinoalloteichus spitiensis RepID=UPI000361864E
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1222_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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231..818
DNA (588bp) protein (196aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1222_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(831..1679)
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WIS7_9NOCA
sucrase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1222_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1676..3451)
DNA (1776bp) protein (592aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K9_CONWI
carbamoyl-phosphate synthase L chain ATP-binding protein
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADB53943.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3474..4013
DNA (540bp) protein (180aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Tax=Desulfovibrio longus RepID=UPI0003B6D5F4
pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1222_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4187..5224)
DNA (1038bp) protein (346aa)
ABC transporter related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F872_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB48942.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5167..5994)
DNA (828bp) protein (276aa)
Molybdate ABC transporter, inner membrane subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F871_CONWI
molybdate ABC transporter inner membrane subunit
Molybdate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADB48941.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5991..6746)
DNA (756bp) protein (252aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F870_CONWI
molybdenum ABC transporter periplasmic molybdate-binding protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:ADB48940.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6743..7120)
DNA (378bp) protein (126aa)
DNA binding domain protein, excisionase family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZB8_CONWI
excisionase family DNA binding domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1222_10
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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7146..8003
DNA (858bp) protein (286aa)
Uncharacterized protein Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YM44_LYNSP
N-acetyltransferase GCN5
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3-1_50_b1_sep16_scaffold_1222_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8000..8851
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7D4_HERA2
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1222_12
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8844..9380
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4RH18_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK32839.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3-1_50_b1_sep16_scaffold_1222_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(9409..10212)
DNA (804bp) protein (268aa)
alpha/beta hydrolase bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hydrolase
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_1222_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10209..11774)
DNA (1566bp) protein (522aa)
Carboxyl transferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0J9_CONWI
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ADB53933.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12209..12706
DNA (498bp) protein (166aa)
Cystathionine gamma-synthase Tax=Amycolatopsis mediterranei RepID=D8HT10_AMYMU
metB; cystathionine gamma-synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1222_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12779..13432
DNA (654bp) protein (218aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Peptide methionine sulfoxide reductase MsrA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA56_CONWI
PLM3-1_50_b1_sep16_scaffold_1222_17
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13445..14245)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000365B5A0
spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AJK55493.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM3-1_50_b1_sep16_scaffold_1222_18
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(14248..15150)
DNA (903bp) protein (301aa)
spermidine/putrescine ABC transporter permease bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine ABC transporter permease
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_1222_19
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15147..16364)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000369472D
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDS86153.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
ABC transporter
PLM3-1_50_b1_sep16_scaffold_1222_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16361..17392)
DNA (1032bp) protein (344aa)
spermidine/putrescine ABC transporter ATP-binding protein Tax=Amycolatopsis benzoatilytica RepID=UPI00037F9E79
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK36440.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
spermidine/putrescine ABC transporter ATPase
PLM3-1_50_b1_sep16_scaffold_1222_21
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..18653)
DNA (1272bp) protein (424aa)
4-aminobutyrate aminotransferase Tax=Desulfovibrio sp. X2 RepID=S7VIZ9_9DELT
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:EPR44528.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
gabT; 4-aminobutyrate aminotransferase and related aminotransferase
PLM3-1_50_b1_sep16_scaffold_1222_trna_1
unknown

Not on your lists

18730..18802
DNA (73bp)
transferRNA Thr
PLM3-1_50_b1_sep16_scaffold_1222_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18821..19486)
DNA (666bp) protein (222aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1222_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19706..20062
DNA (357bp) protein (119aa)
Response regulator receiver protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H3_CONWI
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB52136.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20059..22167
DNA (2109bp) protein (703aa)
Integral membrane sensor signal transduction histidine kinase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H2_CONWI
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB52135.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1222_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22268..22507
DNA (240bp) protein (80aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1222_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22797..23936
DNA (1140bp) protein (380aa)
Two component transcriptional regulator, LuxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H1_CONWI
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB52134.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
LuxR family transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_1222_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24046..25569
DNA (1524bp) protein (508aa)
Anti-sigma factor antagonist Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ41_CONWI
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 28 items

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