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PLM3-1_50_b1_sep16_scaffold_1411

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1411_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3..575
DNA (573bp) protein (191aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E68FC
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1411_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1321..2250
DNA (930bp) protein (310aa)
Surface lipoprotein Tax=Caldanaerobacter subterraneus RepID=Q8RCH2_THETN
Med; surface lipoprotein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1411_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2243..3907)
DNA (1665bp) protein (555aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036CE816
SARP family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1411_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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4494..5168
DNA (675bp) protein (225aa)
Integral membrane sensor signal transduction histidine kinase Tax=Frankia sp. CN3 RepID=G6HPX7_9ACTO
multi-sensor signal transduction histidine kinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1411_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5171..5836)
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZV3_CONWI
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB49929.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1411_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5854..6228
DNA (375bp) protein (125aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000375E633
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3-1_50_b1_sep16_scaffold_1411_7
unknown

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comp(6118..6372)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1411_8
unknown

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6443..6913
DNA (471bp) protein (157aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1411_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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6934..8808
DNA (1875bp) protein (625aa)
histidine kinase, partial Tax=Ideonella sp. B508-1 RepID=UPI0003B510DD
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_50_b1_sep16_scaffold_1411_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8798..9172
DNA (375bp) protein (125aa)
Response regulator receiver protein bin=GWC2_Methylomirabilis_70_24 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
chemotaxis protein CheY
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3-1_50_b1_sep16_scaffold_1411_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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9165..10304
DNA (1140bp) protein (380aa)
Adenylate/guanylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate/guanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_50_b1_sep16_scaffold_1411_12
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10628..11194)
DNA (567bp) protein (189aa)
GCN5 family acetyltransferase Tax=Streptomyces canus RepID=UPI000376552F
Acetyltransferase {ECO:0000313|EMBL:EDY54806.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
acetyltransferase
PLM3-1_50_b1_sep16_scaffold_1411_13
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11223..11768)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4NDG4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ36294.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1411_14
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11980..12981)
DNA (1002bp) protein (334aa)
Putative transposase Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=O69923_STRCO
SC3C8.11c; transposase
Putative transposase {ECO:0000313|EMBL:CAA19603.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
Displaying 14 items

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