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PLM3-1_50_b1_sep16_scaffold_1465

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1465_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..1178)
DNA (1176bp) protein (392aa)
Aminoacyl-histidine dipeptidase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNJ6_METH6
Aminoacyl-histidine dipeptidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1175..1621)
DNA (447bp) protein (149aa)
membrane protein Tax=Desulfovibrio desulfuricans RepID=UPI0003B36079
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1669..1935
DNA (267bp) protein (89aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_4
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

1932..2747
DNA (816bp) protein (272aa)
enoyl-CoA hydratase/isomerase; K01661 naphthoate synthase [EC:4.1.3.36] bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacillus fordii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
2-ketocyclohexane-carboxyl-CoA hydrolase, BadI
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2776..3549
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5E6_CONWI
enoyl-CoA hydratase/isomerase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3555..4520
DNA (966bp) protein (322aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B73706
proline racemase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4618..6186
DNA (1569bp) protein (523aa)
Serine/threonine protein kinase with PASTA sensor(S) Tax=Nitrolancetus hollandicus Lb RepID=I4EHG5_9CHLR
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:CCF84127.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1465_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6428..9727)
DNA (3300bp) protein (1100aa)
hypothetical protein Tax=Xanthomonas sp. SHU199 RepID=UPI00037B4302
Uncharacterized protein {ECO:0000313|EMBL:EYR66783.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1465_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9806..11323)
DNA (1518bp) protein (506aa)
glycerol-3-phosphate dehydrogenase Tax=Streptomyces rapamycinicus RepID=UPI000383134A
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHH96168.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3-1_50_b1_sep16_scaffold_1465_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11456..12277
DNA (822bp) protein (274aa)
hypothetical protein bin=bin8_Chloro species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
integral membrane protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1465_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12274..12699)
DNA (426bp) protein (142aa)
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
L-carnitine dehydrogenase Tax=Lutibaculum baratangense AMV1 RepID=V4QUP7_9RHIZ
bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase
PLM3-1_50_b1_sep16_scaffold_1465_12
unknown

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13257..13847
DNA (591bp) protein (197aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1465_13
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13655..14551)
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Rhizobium mesoamericanum STM3625 RepID=K0PJT0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM76736.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1465_14
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14594..15694)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000382594A
L-alanine-DL-glutamate epimerase of enolase superfamily {ECO:0000313|EMBL:EDQ34218.2}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
mandelate racemase/muconate lactonizing protein
PLM3-1_50_b1_sep16_scaffold_1465_15
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15691..16779)
DNA (1089bp) protein (363aa)
zinc-binding dehydrogenase Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000365F1AC
Zinc-binding dehydrogenase family oxidoreductase {ECO:0000313|EMBL:EIM72116.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
formaldehyde dehydrogenase
PLM3-1_50_b1_sep16_scaffold_1465_16
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16776..18308)
DNA (1533bp) protein (511aa)
betC; choline-sulfatase (EC:3.1.6.6)
Choline-sulfatase Tax=Loktanella cinnabarina LL-001 RepID=U3A8R5_9RHOB
Choline-sulfatase {ECO:0000313|EMBL:GAD54064.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
PLM3-1_50_b1_sep16_scaffold_1465_17
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18321..19262)
DNA (942bp) protein (314aa)
hprA; glycerate dehydrogenase (EC:1.1.1.29)
Putative glycerate dehydrogenase {ECO:0000313|EMBL:BAH52974.1}; EC=1.1.1.29 {ECO:0000313|EMBL:BAH52974.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
Putative glycerate dehydrogenase Tax=Rhodococcus opacus (strain B4) RepID=C1BBC1_RHOOB
PLM3-1_50_b1_sep16_scaffold_1465_18
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(19269..20381)
DNA (1113bp) protein (371aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
Histidinol-phosphate aminotransferase Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8X7_THELD
histidinol-phosphate aminotransferase
PLM3-1_50_b1_sep16_scaffold_1465_19
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20434..21132)
DNA (699bp) protein (233aa)
GntR family transcriptional regulator Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T367_AMYOR
gntR; GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGM09290.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM3-1_50_b1_sep16_scaffold_1465_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21299..22576
DNA (1278bp) protein (426aa)
Probable peptide ABC transporter,substrate-binding protein Tax=Saccharopolyspora erythraea RepID=A4F8F0_SACEN
peptide ABC transporter,substrate-binding protein
Probable peptide ABC transporter,substrate-binding protein {ECO:0000313|EMBL:CAM00325.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Displaying 20 items

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