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PLM3-1_50_b1_sep16_scaffold_1541

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1541_1
unknown

Not on your lists

1..81
DNA (81bp) protein (27aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

313..924
DNA (612bp) protein (204aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI00035C0A9A
Cupin 2 domain-containing protein {ECO:0000313|EMBL:CDX13693.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cupin
PLM3-1_50_b1_sep16_scaffold_1541_3
Pseudoalteromonas haloplanktis, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1242..2387
DNA (1146bp) protein (382aa)
integrase Tax=Brachybacterium paraconglomeratum RepID=UPI00026C68E2
site-specific recombinase, integrase family
Putative phage integrase {ECO:0000313|EMBL:CAI87166.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas haloplanktis (strain TAC 125).;"
PLM3-1_50_b1_sep16_scaffold_1541_4
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2595..4679)
DNA (2085bp) protein (695aa)
hypothetical protein Tax=Streptomyces sp. CNT372 RepID=UPI00036F189B
NHL repeat containing protein {ECO:0000313|EMBL:EME67151.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
NHL repeat containing protein
PLM3-1_50_b1_sep16_scaffold_1541_5
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5115..6236
DNA (1122bp) protein (374aa)
Site-specific recombinase, phage integrase family Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4G9_9ACTO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3-1_50_b1_sep16_scaffold_1541_trna_2
unknown

Not on your lists

comp(6338..6410)
DNA (73bp)
transferRNA Thr
PLM3-1_50_b1_sep16_scaffold_1541_6
unknown

Not on your lists

7053..7562
DNA (510bp) protein (170aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_7

Not on your lists

7607..8011
DNA (405bp) protein (135aa)
hypothetical protein Tax=Mycobacterium sp. 141 RepID=UPI00035E1B91
Marine sediment metagenome DNA, contig: S06H3_C03922 {ECO:0000313|EMBL:GAI13423.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1541_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8164..9183)
DNA (1020bp) protein (340aa)
peptide ABC transporter ATPase Tax=Nonomuraea coxensis RepID=UPI0003635928
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ETK38050.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peptide ABC transporter ATP-binding protein
PLM3-1_50_b1_sep16_scaffold_1541_9
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9180..10187)
DNA (1008bp) protein (336aa)
ABC transporter ATP-binding protein Tax=Streptomyces collinus Tu 365 RepID=S5VA07_STRCU
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGS71944.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM3-1_50_b1_sep16_scaffold_1541_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10189..11187)
DNA (999bp) protein (333aa)
Binding-protein-dependent transport systems inner membrane component Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F307_CONWI
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1541_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11191..12975)
DNA (1785bp) protein (595aa)
Extracellular solute-binding protein family 5 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F308_CONWI
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADB54289.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1541_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13005..13970)
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F309_CONWI
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1541_13
unknown

Not on your lists

comp(13967..14620)
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_14
unknown

Not on your lists

comp(14630..15232)
DNA (603bp) protein (201aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_15
unknown

Not on your lists

15417..15674
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15912..16523)
DNA (612bp) protein (204aa)
peptidase M50 Tax=Salinispora arenicola RepID=UPI00036BA17A
peptidase M50
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1541_17
unknown

Not on your lists

16754..17038
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_18
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17035..18210)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000371E417
ATPase {ECO:0000313|EMBL:AII05565.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
integral membrane sensor signal transduction histidine kinase
PLM3-1_50_b1_sep16_scaffold_1541_19
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18221..18886)
DNA (666bp) protein (222aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI0003806918
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV76906.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3-1_50_b1_sep16_scaffold_1541_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18902..20059)
DNA (1158bp) protein (386aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAW3_CONWI
peptidase S1 and S6 chymotrypsin/Hap
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1541_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20216..22225
DNA (2010bp) protein (670aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH 3 {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
cell division protein FtsH Tax=Frankia sp. Iso899 RepID=UPI0003B5F2A8
PLM3-1_50_b1_sep16_scaffold_1541_22
unknown

Not on your lists

22222..22389
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1541_23
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

22386..22871
DNA (486bp) protein (162aa)
Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
PLM3-1_50_b1_sep16_scaffold_1541_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23036..23371
DNA (336bp) protein (112aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1541_trna_1
unknown

Not on your lists

comp(23802..23883)
DNA (82bp)
transferRNA Tyr
PLM3-1_50_b1_sep16_scaffold_1541_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23933..25093
DNA (1161bp) protein (387aa)
Geranylgeranyl reductase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKB3_MOOTA
geranylgeranyl reductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1541_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25112..25507)
DNA (396bp) protein (132aa)
Tfp pilus assembly protein PilE Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWV4_RUBXD
Tfp pilus assembly protein PilE
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1541_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

25635..26027
DNA (393bp) protein (131aa)
Cupin 2 conserved barrel domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3J6_CONWI
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB52361.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1541_28
unknown

Not on your lists

comp(26043..26162)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 30 items

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