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PLM3-1_50_b1_sep16_scaffold_1736

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1736_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2..178
DNA (177bp) protein (59aa)
Maf-like protein Cwoe_2657 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9L4_CONWI
maf protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1736_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(187..1116)
DNA (930bp) protein (310aa)
NAD-dependent epimerase/dehydratase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEJ4_GEOUR
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1736_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1269..2036)
DNA (768bp) protein (256aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036F5D8D
type 11 methyltransferase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3-1_50_b1_sep16_scaffold_1736_4

Not on your lists

comp(2029..2445)
DNA (417bp) protein (139aa)
Nucleoside-diphosphate kinase {ECO:0000313|EMBL:EQD61655.1}; EC=2.7.4.6 {ECO:0000313|EMBL:EQD61655.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Nucleoside-diphosphate kinase Tax=mine drainage metagenome RepID=T1C6D6_9ZZZZ
nucleoside diphosphate kinase
PLM3-1_50_b1_sep16_scaffold_1736_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2459..2971)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9L2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51074.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1736_6
unknown

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comp(2968..3081)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1736_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3069..4127)
DNA (1059bp) protein (353aa)
Bifunctional protein FolC Tax=Clostridium sp. CAG:678 RepID=R5L6M8_9CLOT
Bifunctional protein FolC {ECO:0000313|EMBL:CCY68657.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
PLM3-1_50_b1_sep16_scaffold_1736_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(4133..5470)
DNA (1338bp) protein (446aa)
Valine--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K9_CONWI
valyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1736_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6798..7019)
DNA (222bp) protein (74aa)
Carbamate kinase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0J1_9BRAD
thioesterase superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1736_10
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7235..8866)
DNA (1632bp) protein (544aa)
gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltransferase Tax=Achromobacter xylosoxidans AXX-A RepID=F7T367_ALCXX
Gamma-glutamyltransferase {ECO:0000313|EMBL:EGP45236.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
PLM3-1_50_b1_sep16_scaffold_1736_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8911..9990)
DNA (1080bp) protein (360aa)
Methyltransferase type 11 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHB1_ANADF
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABS28107.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3-1_50_b1_sep16_scaffold_1736_12
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10067..11344)
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K6_CONWI
ATP-dependent Clp protease ATP-binding subunit ClpX
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_50_b1_sep16_scaffold_1736_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11389..11976)
DNA (588bp) protein (196aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
ATP-dependent Clp protease proteolytic subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K5_CONWI
PLM3-1_50_b1_sep16_scaffold_1736_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11973..13331)
DNA (1359bp) protein (453aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Trigger factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K4_CONWI
trigger factor
PLM3-1_50_b1_sep16_scaffold_1736_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13557..14675
DNA (1119bp) protein (373aa)
sarcosine oxidase (EC:1.5.3.1)
Sarcosine oxidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C691_SPHTD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1736_trna_1
unknown

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14818..14901
DNA (84bp)
transferRNA Leu
PLM3-1_50_b1_sep16_scaffold_1736_16

Not on your lists

15092..15934
DNA (843bp) protein (281aa)
Putative ribonuclease BN Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRY9_ACIC1
Marine sediment metagenome DNA, contig: S01H1_L00866 {ECO:0000313|EMBL:GAF71329.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative ribonuclease BN
PLM3-1_50_b1_sep16_scaffold_1736_17
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16080..16976)
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Rhodococcus sp. EsD8 RepID=N1MCJ4_9NOCA
Sodium:proton antiporter {ECO:0000313|EMBL:AKE88052.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
CPA1 family Na(+)/H(+) antiporter
PLM3-1_50_b1_sep16_scaffold_1736_18
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17008..17334)
DNA (327bp) protein (109aa)
Putative transporter Tax=Gordonia amicalis NBRC 100051 = JCM 11271 RepID=L7KW60_9ACTO
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ETT27431.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
CPA1 family Na(+)/H(+) antiporter
PLM3-1_50_b1_sep16_scaffold_1736_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17732..19699
DNA (1968bp) protein (656aa)
Diguanylate cyclase and metal dependent phosphohydrolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT8_CONWI
diguanylate cyclase and metal dependent phosphohydrolase
Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:ADB51353.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1736_trna_2
unknown

Not on your lists

19729..19800
DNA (72bp)
transferRNA Arg
PLM3-1_50_b1_sep16_scaffold_1736_20
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(19949..21154)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein Tax=uncultured candidate division OP1 bacterium RepID=H5SSQ3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
PLM3-1_50_b1_sep16_scaffold_1736_21
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21337..22020)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003621763
Uncharacterized protein {ECO:0000313|EMBL:CEA09414.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1736_22
unknown

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comp(22605..23228)
DNA (624bp) protein (208aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1736_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23498..23857)
DNA (360bp) protein (120aa)
Ig family protein Tax=Paenibacillus elgii RepID=UPI000248D070
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 25 items

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