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PLM3-1_50_b1_sep16_scaffold_1988

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1988_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1..714
DNA (714bp) protein (238aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003797AC1
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

738..980
DNA (243bp) protein (81aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

986..1846
DNA (861bp) protein (287aa)
family 3 adenylate cyclase bin=RBG_19FT_COMBO_GAL15_69_19 species=Rhodococcus sp. EsD8 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
family 3 adenylate cyclase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1843..3498
DNA (1656bp) protein (552aa)
pyridine nucleotide-disulfide oxidoreductase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268F5
trxB; response regulator/thioredoxin-disulfide reductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3543..4079)
DNA (537bp) protein (179aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_6
unknown

Not on your lists

comp(4089..4562)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1988_7
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(4568..5011)
DNA (444bp) protein (148aa)
Glycosyl transferase family 2 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
family 2 glycosyl transferase
Tax=GWC2_Nitrospirae_56_14_curated
PLM3-1_50_b1_sep16_scaffold_1988_8
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5069..5296)
DNA (228bp) protein (76aa)
Glycosyl transferase family 2 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHC4_CELFN
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG75245.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
PLM3-1_50_b1_sep16_scaffold_1988_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5323..6474)
DNA (1152bp) protein (384aa)
Sarcosine oxidase subunit beta Tax=Saccharopolyspora erythraea RepID=A4FGH7_SACEN
sarcosine oxidase subunit beta
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:AHH93582.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3-1_50_b1_sep16_scaffold_1988_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6471..7874)
DNA (1404bp) protein (468aa)
Proline dehydrogenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAQ8_SPHTD
proline dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7901..8275)
DNA (375bp) protein (125aa)
UPF0301 protein Cwoe_0090 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F443_CONWI
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1988_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8471..9481
DNA (1011bp) protein (337aa)
NADP-dependent oxidoreductase Tax=Streptomyces sp. SS RepID=UPI0002DB537F
NADP-dependent oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9897..10316)
DNA (420bp) protein (140aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10313..10726)
DNA (414bp) protein (138aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10988..12139
DNA (1152bp) protein (384aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F961_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12227..12745
DNA (519bp) protein (173aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13021..13854
DNA (834bp) protein (278aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase Tax=Caldibacillus debilis RepID=UPI0003776918
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13854..14828
DNA (975bp) protein (325aa)
Methyltransferase type 11 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B827_METTP
methyltransferase type 11
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14839..16023
DNA (1185bp) protein (395aa)
Acyl-CoA dehydrogenase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F963_CONWI
acyl-CoA dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16032..16463)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGC4_VERMA
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16468..17070
DNA (603bp) protein (201aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase Tax=Patulibacter americanus RepID=UPI0003B4AA46
ATP:cob(I)alamin adenosyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17109..17792
DNA (684bp) protein (228aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C52D1
putative sulfonate transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17612..19177)
DNA (1566bp) protein (522aa)
membrane protein Tax=Ralstonia solanacearum RepID=UPI000181702F
Uncharacterized signaling protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19509..20159
DNA (651bp) protein (217aa)
Leader peptidase (Prepilin peptidase) Tax=Patulibacter medicamentivorans RepID=H0EC51_9ACTN
Type II secretory pathway prepilin signal peptidase PulO and related peptidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1988_25
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

20236..20787
DNA (552bp) protein (184aa)
hypothetical protein Tax=Deinococcus aquatilis RepID=UPI0003601B4F
histidine kinase
Tax=RBG_13_Chloroflexi_68_17_curated
Displaying 25 items

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