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PLM3-1_50_b1_sep16_scaffold_3090

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_3090_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2..427
DNA (426bp) protein (142aa)
Dehydrogenase Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPR5_9RHIZ
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_3090_2
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

430..1527
DNA (1098bp) protein (366aa)
UPI0003CE5048 related cluster Tax=unknown RepID=UPI0003CE5048
dehydrogenase
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
PLM3-1_50_b1_sep16_scaffold_3090_3
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1614..1913
DNA (300bp) protein (100aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000374CF98
Cupin {ECO:0000313|EMBL:ELZ61084.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
yoaN; cupin
PLM3-1_50_b1_sep16_scaffold_3090_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2107..2607
DNA (501bp) protein (167aa)
ECF subfamily RNA polymerase sigma-24 subunit bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3090_5
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

2604..3869
DNA (1266bp) protein (422aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037E3563
APHP domain-containing protein
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3-1_50_b1_sep16_scaffold_3090_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

3878..4570
DNA (693bp) protein (231aa)
id=14628700 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_3090_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4652..5050)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XMM1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34427.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3-1_50_b1_sep16_scaffold_3090_8
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5059..5475)
DNA (417bp) protein (139aa)
Lactoylglutathione lyase-like lyase Tax=Saccharomonospora cyanea NA-134 RepID=H5XFQ2_9PSEU
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EHR60444.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
glyoxalase
PLM3-1_50_b1_sep16_scaffold_3090_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5494..5943)
DNA (450bp) protein (150aa)
Transcriptional regulator, AraC family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9R4_CONWI
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB51126.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_3090_10
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6003..6260)
DNA (258bp) protein (86aa)
Potassium transporter (Trk family) protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EWS99908.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM3-1_50_b1_sep16_scaffold_3090_11
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6263..7195)
DNA (933bp) protein (311aa)
Putative FAD dependent oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=Cyanobium gracile genus=Cyanobium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EWS99908.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
monooxygenase
PLM3-1_50_b1_sep16_scaffold_3090_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7409..7789)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F576_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB48654.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_3090_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

7998..9059
DNA (1062bp) protein (354aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THR4_9CHLR
PLM3-1_50_b1_sep16_scaffold_3090_14
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9137..9673)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Streptomyces sp. CNY243 RepID=UPI0003718527
Uncharacterized protein {ECO:0000313|EMBL:KJK12368.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_3090_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9684..10904)
DNA (1221bp) protein (407aa)
Threonine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ4_CONWI
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ADB51610.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_3090_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11099..11536)
DNA (438bp) protein (146aa)
CBS domain containing membrane protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DTT3_THIND
yhcV_[H]; CBS domain containing membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_50_b1_sep16_scaffold_3090_17
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11607..11834)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI0003751480
Uncharacterized protein {ECO:0000313|EMBL:GAM44282.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
PLM3-1_50_b1_sep16_scaffold_3090_18
unknown

Not on your lists

comp(11838..12188)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_3090_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12280..13299)
DNA (1020bp) protein (340aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RJ23_MYCRN
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EXG81414.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
alpha/beta hydrolase
PLM3-1_50_b1_sep16_scaffold_3090_20
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13393..13875
DNA (483bp) protein (161aa)
GCN5-related N-acetyltransferase Tax=Methylobacterium sp. (strain 4-46) RepID=B0UMD2_METS4
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACA16071.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM3-1_50_b1_sep16_scaffold_3090_21
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14076..14420
DNA (345bp) protein (115aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003609B3D
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
rhodanese-like domain-containing protein
PLM3-1_50_b1_sep16_scaffold_3090_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14417..14848)
DNA (432bp) protein (144aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U432_9CHLR
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFH81270.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3-1_50_b1_sep16_scaffold_3090_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14896..15111
DNA (216bp) protein (72aa)
hypothetical protein Tax=Streptomyces sp. LaPpAH-108 RepID=UPI0003801A62
4-oxalocrotonate tautomerase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3090_24
unknown

Not on your lists

15140..15322
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_3090_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15586..15873)
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 25 items

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