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PLM3-1_50_b1_sep16_scaffold_3239

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_3239_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(717..2078)
DNA (1362bp) protein (454aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B36A56
Uncharacterized protein {ECO:0000313|EMBL:KHK98489.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Major facilitator superfamily MFS_1
PLM3-1_50_b1_sep16_scaffold_3239_2
unknown

Not on your lists

2445..2660
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_3239_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2779..3432)
DNA (654bp) protein (218aa)
hypothetical protein Tax=Streptomyces globisporus RepID=UPI00029B13AB
Sensor histidine kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3429..4280)
DNA (852bp) protein (284aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Streptomyces griseus XylebKG-1 RepID=G0Q9G6_STRGR
serine protease
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4369..4626)
DNA (258bp) protein (86aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4627..5187)
DNA (561bp) protein (187aa)
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
putative RNA polymerase sigma 70 family subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5198..5791)
DNA (594bp) protein (198aa)
Methenyltetrahydrofolate cyclohydrolase Tax=Gloeobacter kilaueensis JS1 RepID=U5QNG5_9CYAN
formiminotransferase-cyclodeaminase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5933..6775
DNA (843bp) protein (281aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SS92_PLABD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6772..7014)
DNA (243bp) protein (81aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7039..7380
DNA (342bp) protein (114aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_11
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

7412..8239
DNA (828bp) protein (276aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SQ19_9BACT
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_3239_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8251..10278
DNA (2028bp) protein (676aa)
acetyl-CoA acetyltransferase (EC:2.3.1.174 2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P1U7_9FIRM
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10395..11030)
DNA (636bp) protein (212aa)
Sulfate ABC transporter, inner membrane subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC29_CONWI
sulfate ABC transporter permease
Sulfate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADB53324.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_3239_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(11056..11670)
DNA (615bp) protein (205aa)
Sulfate ABC transporter, inner membrane subunit CysT Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHK5_THET1
sulfate ABC transporter permease
Sulfate ABC transporter, inner membrane subunit CysT {ECO:0000313|EMBL:ACZ43226.1}; Flags: Precursor;; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_50_b1_sep16_scaffold_3239_15
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(11744..12766)
DNA (1023bp) protein (341aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHK4_THET1
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ACZ43225.1}; Flags: Precursor;; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_50_b1_sep16_scaffold_3239_16
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12911..13378
DNA (468bp) protein (156aa)
BadM/Rrf2 family transcriptional regulator bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Transcriptional regulator superfamily
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_50_b1_sep16_scaffold_3239_17
Bacillus alcalophilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13389..14858
DNA (1470bp) protein (490aa)
betaine-aldehyde dehydrogenase Tax=Laceyella sacchari RepID=UPI0003B3AD2C
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KGA95674.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus alcalophilus ATCC 27647.;"
aldehyde dehydrogenase
PLM3-1_50_b1_sep16_scaffold_3239_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14873..15781
DNA (909bp) protein (303aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] bin=bin8_Chloro species=Colletotrichum higginsianum genus=Colletotrichum taxon_order=Glomerellales taxon_class=Sordariomycetes phylum=Ascomycota tax=bin8_Chloro organism_group=Chloroflexi
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15783..16931
DNA (1149bp) protein (383aa)
Major facilitator superfamily MFS_1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A9X8_THECD
major facilitator superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_20
unknown

Not on your lists

comp(16919..17473)
DNA (555bp) protein (185aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_3239_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17706..17918
DNA (213bp) protein (71aa)
peptidase M20 Tax=Acidovorax radicis RepID=UPI00023769DD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17905..18312)
DNA (408bp) protein (136aa)
PF12903 family protein Tax=Actinomyces massiliensis F0489 RepID=J0NGW9_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18394..19557)
DNA (1164bp) protein (388aa)
Hypothetical membrane spanning protein Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSR0_GRABC
conserved hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19542..20195)
DNA (654bp) protein (218aa)
hydroxyisourate hydrolase (EC:3.5.2.17)
Uncharacterized protein Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2IXP3_MUCC1
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_25
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20192..21523)
DNA (1332bp) protein (444aa)
Amidohydrolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS78_RUBXD
Cytosine deaminase and related metal-dependent hydrolase
Cytosine deaminase and related metal-dependent hydrolase {ECO:0000313|EMBL:AHY46583.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3-1_50_b1_sep16_scaffold_3239_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21520..23214)
DNA (1695bp) protein (565aa)
adenine deaminase (EC:3.5.4.2)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B55181
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23287..24405
DNA (1119bp) protein (373aa)
Nucleoside-binding protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH38_MOOTA
basic membrane lipoprotein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24488..25993
DNA (1506bp) protein (502aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ22_CALAS
putative ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

26216..27112
DNA (897bp) protein (299aa)
Nucleoside ABC transporter membrane protein Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E696_9FIRM
inner-membrane translocator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_3239_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

27109..28077
DNA (969bp) protein (323aa)
Inner-membrane translocator Tax=Thermincola potens (strain JR) RepID=D5XD96_THEPJ
inner-membrane translocator
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 33 in total

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