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PLM3-1_50_b1_sep16_scaffold_2189

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2189_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..627)
DNA (627bp) protein (209aa)
Cation transporter Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZQL5_9ACTO
cation transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2189_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

714..2867
DNA (2154bp) protein (718aa)
Uncharacterized protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLZ5_MARHT
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_2189_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2868..3086)
DNA (219bp) protein (73aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2189_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3097..3558)
DNA (462bp) protein (154aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2189_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3555..3941)
DNA (387bp) protein (129aa)
VanZ family protein bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
VanZ family protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_2189_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4111..5037
DNA (927bp) protein (309aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000372C14F
periplasmic binding protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_2189_7
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5042..6106
DNA (1065bp) protein (355aa)
Vitamin B12 ABC transporter, permease component BtuC Tax=Rhodococcus sp. EsD8 RepID=N1MCR4_9NOCA
ABC transporter permease
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_50_b1_sep16_scaffold_2189_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6108..6884
DNA (777bp) protein (259aa)
Hemin import ATP-binding protein HmuV Tax=Micromonospora lupini str. Lupac 08 RepID=I0KV26_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66678.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ABC transporter
PLM3-1_50_b1_sep16_scaffold_2189_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6908..7222
DNA (315bp) protein (105aa)
Transcriptional regulator, PadR-like family Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QKF8_CATAD
PadR family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACU77057.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3-1_50_b1_sep16_scaffold_2189_10
unknown

Not on your lists

7219..7860
DNA (642bp) protein (214aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_11
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7957..8859
DNA (903bp) protein (301aa)
Endonuclease/exonuclease/phosphatase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKU2_HALO1
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACY16662.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3-1_50_b1_sep16_scaffold_2189_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8868..9257)
DNA (390bp) protein (130aa)
extradiol dioxygenase Tax=Rhodococcus sp. DK17 RepID=UPI00036316D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH54247.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM3-1_50_b1_sep16_scaffold_2189_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9794..11947
DNA (2154bp) protein (718aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
UvrD/REP helicase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0E7_CONWI
UvrD/REP helicase
PLM3-1_50_b1_sep16_scaffold_2189_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11971..13194
DNA (1224bp) protein (408aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQM5_SORC5
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:CAN90467.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM3-1_50_b1_sep16_scaffold_2189_15

Not on your lists

comp(13205..13831)
DNA (627bp) protein (209aa)
Membrane protein-like protein Tax=Prevotella sp. CAG:1320 RepID=R6ECI0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKK84668.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_2189_16
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(14092..14487)
DNA (396bp) protein (132aa)
Ribonuclease H Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B816_THEAS
ribonuclease H
Tax=RBG_16_Bdellovibrionales_40_8_curated
PLM3-1_50_b1_sep16_scaffold_2189_17
unknown

Not on your lists

comp(14586..14903)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_18
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14900..16084)
DNA (1185bp) protein (395aa)
Integrase family protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8K7_GEOOG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADB75588.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3-1_50_b1_sep16_scaffold_2189_19
unknown

Not on your lists

comp(16176..16430)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_20
unknown

Not on your lists

comp(16427..17344)
DNA (918bp) protein (306aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_21
unknown

Not on your lists

comp(17335..17703)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_22
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17878..18702)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4M0B7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL20935.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3-1_50_b1_sep16_scaffold_2189_23
unknown

Not on your lists

comp(19012..19212)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_24
unknown

Not on your lists

19266..19934
DNA (669bp) protein (223aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_25
unknown

Not on your lists

20000..20458
DNA (459bp) protein (153aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_26
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(21489..23006)
DNA (1518bp) protein (506aa)
Aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:AEB12657.1}; EC=4.1.1.28 {ECO:0000313|EMBL:AEB12657.1};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Aromatic-L-amino-acid decarboxylase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ7_MARHT
PLM3-1_50_b1_sep16_scaffold_2189_27
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23721..25802
DNA (2082bp) protein (694aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037C2BCF
Uncharacterized protein {ECO:0000313|EMBL:EWT06482.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_2189_28
unknown

Not on your lists

25893..26258
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2189_29
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26897..27487
DNA (591bp) protein (197aa)
Adenylate/guanylate cyclase Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CQQ8_9ACTO
Adenylate/guanylate cyclase
Uncharacterized protein {ECO:0000313|EMBL:AGK77274.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
PLM3-1_50_b1_sep16_scaffold_2189_30
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(27494..28255)
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PS25_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; mitosporic Ophiostomataceae; Sporothrix.;" source="Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183); (Rose-picker's disease fungus).;"
cell surface protein
Displaying items 1-30 of 42 in total

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