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PLM3-1_50_b1_sep16_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_234_1
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..1206
DNA (1206bp) protein (402aa)
Probable transcriptional regulator Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FJB8_PAEMK
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:AEI39881.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
PLM3-1_50_b1_sep16_scaffold_234_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1155..2549)
DNA (1395bp) protein (465aa)
metal dependent phosphohydrolase bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3-1_50_b1_sep16_scaffold_234_3
unknown

Not on your lists

2959..3084
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_234_4
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3343..4890
DNA (1548bp) protein (516aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000376C9D8
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDB03380.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
solute binding transport lipoprotein
PLM3-1_50_b1_sep16_scaffold_234_5
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..6052
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035F34A6
Peptide ABC transporter permease {ECO:0000313|EMBL:KDB03379.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
ABC-type dipeptide/oligopeptide transport systems, permease component
PLM3-1_50_b1_sep16_scaffold_234_6
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6052..7044
DNA (993bp) protein (331aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00035E017D
Peptide ABC transporter permease {ECO:0000313|EMBL:KDB03378.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
binding-protein-dependent transport system inner membrane protein
PLM3-1_50_b1_sep16_scaffold_234_7
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7041..8069
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035DE2D0
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KDB03377.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
oppD; oligopeptide ABC transporter ATP-binding protein
PLM3-1_50_b1_sep16_scaffold_234_8
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8073..9335
DNA (1263bp) protein (421aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003785E1B
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDB03376.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
oligopeptide/dipeptide ABC transporter ATPase
PLM3-1_50_b1_sep16_scaffold_234_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9346..10416)
DNA (1071bp) protein (357aa)
RNA polymerase sigma 70 Tax=Patulibacter americanus RepID=UPI0003B5C1FE
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10699..13227)
DNA (2529bp) protein (843aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7B827_NOCDD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13505..14074
DNA (570bp) protein (190aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0ECJ5_THECK
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14071..14904
DNA (834bp) protein (278aa)
DNA polymerase I Tax=Frankia sp. QA3 RepID=I8ZV44_9ACTO
DNA polymerase I
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14895..15752
DNA (858bp) protein (286aa)
Histone deacetylase superfamily Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C288_SPHTD
histone deacetylase superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15749..16282)
DNA (534bp) protein (178aa)
Transcriptional regulatory protein liaR Tax=Nitrolancetus hollandicus Lb RepID=I4EFN7_9CHLR
two component transcriptional regulator, LuxR family
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16289..17812
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Ornithinimicrobium pekingense RepID=UPI0003B72E8F
putative two component system histidine kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_16
RLO_PLX_64_10, Bacteria

Not on your lists

comp(17823..18461)
DNA (639bp) protein (213aa)
nitrile hydratase subunit alpha (EC:4.2.1.84)
Nitrile hydratase, alpha subunit Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN4_RUBXD
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_50_b1_sep16_scaffold_234_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18458..18739)
DNA (282bp) protein (94aa)
Putative ScnA-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN5_RUBXD
putative ScnA-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_50_b1_sep16_scaffold_234_18

Not on your lists

comp(18736..19011)
DNA (276bp) protein (92aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8H0_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08879.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG5H11.;"
putative ScnB-like protein
PLM3-1_50_b1_sep16_scaffold_234_19
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19291..19746)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000377B7DF
Transcriptional regulator {ECO:0000313|EMBL:ETA04976.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans CGMCC 6845.;"
transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_234_20
unknown

Not on your lists

19810..20151
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_234_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20698..20931)
DNA (234bp) protein (78aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20928..21596)
DNA (669bp) protein (223aa)
LexA family transcriptional repressor (EC:3.4.21.88)
umuDC operon protein-like protein Tax=Patulibacter americanus RepID=UPI0003B3EDFD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21636..22373)
DNA (738bp) protein (246aa)
Methyltransferase type 11 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRE9_THISH
type 11 methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_trna_1
unknown

Not on your lists

comp(22412..22496)
DNA (85bp)
transferRNA Leu
PLM3-1_50_b1_sep16_scaffold_234_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22511..22735)
DNA (225bp) protein (75aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22773..23003
DNA (231bp) protein (77aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22939..23961)
DNA (1023bp) protein (341aa)
Predicted glycosyltransferase Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PW42_METTM
glycosyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_234_27
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(24015..25487)
DNA (1473bp) protein (491aa)
Putative monooxygenase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BEU0_MEISD
putative monooxygenase
Putative monooxygenase {ECO:0000313|EMBL:ADH63293.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM3-1_50_b1_sep16_scaffold_234_28
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25468..27093)
DNA (1626bp) protein (542aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EGK14256.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EGK14256.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
Methylmalonyl-CoA mutase Tax=Desmospora sp. 8437 RepID=F5SB61_9BACL
methylmalonyl-CoA mutase N-terminal domain-containing protein
PLM3-1_50_b1_sep16_scaffold_234_29
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(27062..27718)
DNA (657bp) protein (219aa)
Transcriptional regulator, GntR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4U7_CONWI
GntR family transcriptional regulator
Tax=RBG_16_Chloroflexi_58_14_curated
Displaying items 1-30 of 35 in total

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