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PLM3-1_50_b1_sep16_scaffold_254

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_254_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..443)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Nocardiopsis RepID=UPI0003765A0A
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(424..1701)
DNA (1278bp) protein (426aa)
AAA ATPase central domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y7_CONWI
ATPase AAA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1722..2438
DNA (717bp) protein (239aa)
Tryptophan 2,3-dioxygenase (EC:1.13.11.11)
tryptophan 23-dioxygenase Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00037507D0
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2435..3739
DNA (1305bp) protein (435aa)
Peptidase M20 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y6_CONWI
peptidase M20
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_5
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3736..4977
DNA (1242bp) protein (414aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
UPI0003CE6879 related cluster Tax=unknown RepID=UPI0003CE6879
zwf1; glucose-6-phosphate 1-dehydrogenase
PLM3-1_50_b1_sep16_scaffold_254_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5000..5692
DNA (693bp) protein (231aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H4_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5673..6761
DNA (1089bp) protein (363aa)
Chorismate binding-like protein Tax=Micromonospora sp. (strain L5) RepID=E8S8B1_MICSL
chorismate binding-like protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6865..7695
DNA (831bp) protein (277aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000367D37C
pabC; 4-amino-4-deoxychorismate lyase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7698..8486
DNA (789bp) protein (263aa)
hypothetical protein Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C046C
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8572..9777
DNA (1206bp) protein (402aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP19_NOCSJ
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9926..11419
DNA (1494bp) protein (498aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
ATP-dependent zinc metalloprotease FtsH Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RA08_AMMDK
PLM3-1_50_b1_sep16_scaffold_254_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11520..11924
DNA (405bp) protein (135aa)
Methylmalonyl-CoA epimerase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y4_CONWI
methylmalonyl-CoA epimerase
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ADB54265.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_254_13
unknown

Not on your lists

11917..12144
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_254_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12157..13095
DNA (939bp) protein (313aa)
Ribosome-binding ATPase YchF Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK23_RHOM4
GTP-binding protein YchF
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13092..13721)
DNA (630bp) protein (210aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13761..14576)
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F367_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50347.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_254_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14652..16565
DNA (1914bp) protein (638aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16562..17359
DNA (798bp) protein (266aa)
Inositol monophosphatase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2U3_CONWI
inositol monophosphatase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_254_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17380..18465
DNA (1086bp) protein (362aa)
sodium:proton antiporter Tax=Salinispora arenicola RepID=UPI00037BAABC
Sodium:proton antiporter {ECO:0000313|EMBL:EWT00545.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_254_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18471..19202
DNA (732bp) protein (244aa)
malate/L-lactate dehydrogenase family protein (EC:1.1.1.-)
Malate/L-lactate dehydrogenase family protein {ECO:0000313|EMBL:AEI05313.1}; EC=1.1.1.- {ECO:0000313|EMBL:AEI05313.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
L-sulfolactate dehydrogenase Tax=Oligotropha carboxidovorans RepID=B6JJQ8_OLICO
PLM3-1_50_b1_sep16_scaffold_254_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19199..20080)
DNA (882bp) protein (294aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5S9W7_9BACT
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_254_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20086..20355)
DNA (270bp) protein (90aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_254_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(20355..21059)
DNA (705bp) protein (235aa)
hydrolase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B557FA
beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_50_b1_sep16_scaffold_254_24
unknown

Not on your lists

comp(21126..21956)
DNA (831bp) protein (277aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_254_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22022..23485)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B39E2F
proton-translocating NADH-quinone oxidoreductase, chain N
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_254_26
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(23482..24924)
DNA (1443bp) protein (481aa)
NADH:ubiquinone oxidoreductase subunit M Tax=Actinoalloteichus spitiensis RepID=UPI000378BA73
proton-translocating NADH-quinone oxidoreductase subunit M
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3-1_50_b1_sep16_scaffold_254_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24927..26810)
DNA (1884bp) protein (628aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Strongly similar to NAD(P)H:quinone oxidoreductase chain 5 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWH4_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_50_b1_sep16_scaffold_254_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(26810..27118)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
NADH-quinone oxidoreductase subunit K Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL6_CONWI
NADH-ubiquinone oxidoreductase chain 4L
Displaying 28 items

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