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PLM3-1_50_b1_sep16_scaffold_477

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_477_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..491
DNA (489bp) protein (163aa)
Heavy metal efflux pump Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABP8_GEMAT
heavy metal efflux pump
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:CEL21707.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
PLM3-1_50_b1_sep16_scaffold_477_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

533..970
DNA (438bp) protein (146aa)
hypothetical protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_477_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1025..4114
DNA (3090bp) protein (1030aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_477_4
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

4638..5342
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SI25_NOCSJ
hypothetical protein
Tax=RBG_16_Euryarchaeota_62_10_curated
PLM3-1_50_b1_sep16_scaffold_477_5
unknown

Not on your lists

comp(5293..5844)
DNA (552bp) protein (184aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_477_6
unknown

Not on your lists

comp(5899..7077)
DNA (1179bp) protein (393aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_477_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7439..7609
DNA (171bp) protein (57aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_477_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7699..7995
DNA (297bp) protein (99aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7984..9213)
DNA (1230bp) protein (410aa)
Outer membrane autotransporter barrel domain protein Tax=Sphingomonas sp. S17 RepID=F3WTW4_9SPHN
Ig family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9294..9725)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JNF4_STRHJ
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9722..10996)
DNA (1275bp) protein (425aa)
Glutamate--tRNA ligase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI5_9BACT
glutamyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_12
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10993..11472)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003744C0E
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG86798.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3-1_50_b1_sep16_scaffold_477_13
unknown

Not on your lists

11576..12022
DNA (447bp) protein (149aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_477_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12265..13143
DNA (879bp) protein (293aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
endonuclease Tax=Patulibacter americanus RepID=UPI0003B3E520
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13209..13613)
DNA (405bp) protein (135aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13738..14775
DNA (1038bp) protein (346aa)
Calcium/proton antiporter CaCA family Tax=Clostridium sp. CAG:221 RepID=R6G5G6_9CLOT
cax; calcium/proton exchanger
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14772..15824)
DNA (1053bp) protein (351aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7B9_SPHTD
Threonine aldolase {ECO:0000313|EMBL:ETW92988.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3-1_50_b1_sep16_scaffold_477_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15839..16819
DNA (981bp) protein (327aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Probable dual-specificity RNA methyltransferase RlmN Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J9_CONWI
radical SAM enzyme, Cfr family
PLM3-1_50_b1_sep16_scaffold_477_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16906..18363)
DNA (1458bp) protein (486aa)
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K7_CONWI
PLM3-1_50_b1_sep16_scaffold_477_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18363..19688)
DNA (1326bp) protein (442aa)
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K8_CONWI
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_477_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19840..20235)
DNA (396bp) protein (132aa)
glycine cleavage system protein H Tax=Patulibacter americanus RepID=UPI0003B6E8EC
glycine cleavage system protein H
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20401..21453)
DNA (1053bp) protein (351aa)
glycine cleavage system protein T Tax=Patulibacter americanus RepID=UPI0003B54B7F
glycine cleavage system protein T
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_477_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21508..22572)
DNA (1065bp) protein (355aa)
Cell division protein FtsZ Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1L1_CONWI
cell division protein FtsZ
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_477_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22716..23525)
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Enterorhabdus caecimuris B7 RepID=R9KVX4_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(23557..24441)
DNA (885bp) protein (295aa)
UDP-N-acetylenolpyruvoylglucosamine reductase 2 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=MURB2_SYMTH
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_477_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24438..25127)
DNA (690bp) protein (230aa)
UDP-N-acetylmuramate--L-alanine ligase Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7R5_CELFA
UDP-N-acetylmuramate/alanine ligase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_27
unknown

Not on your lists

comp(25124..25567)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_477_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25564..26532)
DNA (969bp) protein (323aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C1_CONWI
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_477_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26483..27718)
DNA (1236bp) protein (412aa)
Cell division protein FtsW Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C2_CONWI
cell division protein FtsW
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_477_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(27715..28788)
DNA (1074bp) protein (358aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2C3_CONWI
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 30 items

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