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PLM3-1_50_b1_sep16_scaffold_740

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_740_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_740_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(895..1953)
DNA (1059bp) protein (353aa)
integrase Tax=Frankia sp. BCU110501 RepID=UPI000366E905
integrase catalytic subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_740_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2159..2572)
DNA (414bp) protein (138aa)
Ferritin Dps family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT5_CONWI
ferritin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_4
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

comp(2646..2930)
DNA (285bp) protein (95aa)
heat shock protein Hsp20
hspA-1; ATP-independent chaperone, alpha-crystallin/Hsp20 family; K13993 HSP20 family protein bin=RBG_16_Aminicenantes_63_16_plus species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=RBG_13_Aminicenantes_64_14_curated
PLM3-1_50_b1_sep16_scaffold_740_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2965..3909
DNA (945bp) protein (315aa)
Ornithine carbamoyltransferase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=OTC_SYMTH
ornithine carbamoyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3924..4232
DNA (309bp) protein (103aa)
Putative uncharacterized protein bin=GWB2_Deltaproteobacteria_65_81 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4236..4529
DNA (294bp) protein (98aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4579..5250
DNA (672bp) protein (224aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_trna_1
unknown

Not on your lists

5275..5347
DNA (73bp)
transferRNA Ala
PLM3-1_50_b1_sep16_scaffold_740_9

Not on your lists

comp(6018..7358)
DNA (1341bp) protein (447aa)
Glr2261 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIC2_GLOVI
Glucose dehydrogenase {ECO:0000313|EMBL:AHN98027.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium lac193.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_740_10
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(7719..8156)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:194 RepID=R5R0I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ28051.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_740_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8356..9573)
DNA (1218bp) protein (406aa)
Lytic transglycosylase catalytic Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4W4_CONWI
lytic transglycosylase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9515..12634)
DNA (3120bp) protein (1040aa)
Diguanylate cyclase/phosphodiesterase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW67_ACIC1
diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(12701..14275)
DNA (1575bp) protein (525aa)
aprX; peptidase S8 and S53 subtilisin kexin sedolisin bin=bin8_Chloro species=Actinoplanes sp. genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
aprX; peptidase S8 and S53 subtilisin kexin sedolisin
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_740_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14679..15971)
DNA (1293bp) protein (431aa)
Adenylate cyclase bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
adenylate/guanylate cyclase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_740_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16142..16768
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PY58_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB33664.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3-1_50_b1_sep16_scaffold_740_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

17135..18250
DNA (1116bp) protein (372aa)
Xaa-Pro dipeptidase bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
pepQ; Xaa-Pro dipeptidase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_740_17
RLO_PLX_64_10, Bacteria

Not on your lists

18258..19418
DNA (1161bp) protein (387aa)
Mandelate racemase/muconate lactonizing protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PVP4_STANL
mandelate racemase/muconate lactonizing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_50_b1_sep16_scaffold_740_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19521..20252
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBA6_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB53298.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_740_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20291..21475
DNA (1185bp) protein (395aa)
ABC transporter ATP-binding protein Tax=Actinomadura flavalba RepID=UPI000381A3BF
ABC transporter
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_740_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21486..22310)
DNA (825bp) protein (275aa)
Binding-protein-dependent transport systems inner membrane component Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F741_CONWI
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22307..23281)
DNA (975bp) protein (325aa)
ABC transporter, permease protein Tax=Clostridiales RepID=A5KLU6_9FIRM
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_740_22
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(23221..24573)
DNA (1353bp) protein (451aa)
ABC transporter, solute-binding protein Tax=Clostridiales RepID=A5KLU7_9FIRM
sugar ABC transporter periplasmic protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_50_b1_sep16_scaffold_740_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24840..25865
DNA (1026bp) protein (342aa)
Ectoine utilization protein EutC Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VR73_RHILT
Multidrug DMT transporter permease {ECO:0000313|EMBL:KJB96539.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
multidrug DMT transporter permease
PLM3-1_50_b1_sep16_scaffold_740_24
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25942..27078
DNA (1137bp) protein (379aa)
UPI0003D04BCA related cluster Tax=unknown RepID=UPI0003D04BCA
Class I and II aminotransferase {ECO:0000313|EMBL:CDX25679.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
class I and II aminotransferase
PLM3-1_50_b1_sep16_scaffold_740_25
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27132..28037)
DNA (906bp) protein (302aa)
Putative Acetamidase/Formamidase {ECO:0000313|EMBL:ADE39971.1}; EC=3.5.1.- {ECO:0000313|EMBL:ADE39971.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster; Candidatus Puniceispirillum.;" source="Puniceispirillum marinum (strain IMCC1322).;"
Uncharacterized protein Tax=Sinorhizobium meliloti Rm41 RepID=K0P3P1_RHIML
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_740_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

28372..29454
DNA (1083bp) protein (361aa)
Alanine racemase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB98_CONWI
alanine racemase
Alanine racemase domain protein {ECO:0000313|EMBL:ADB53290.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_740_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

29472..29858
DNA (387bp) protein (129aa)
Aryldialkylphosphatase related protein bin=GWC2_Methylomirabilis_70_16 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_50_b1_sep16_scaffold_740_28
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29855..30634
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR Tax=Ectothiorhodospira sp. PHS-1 RepID=H1FZY6_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHQ51123.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
short-chain dehydrogenase/reductase SDR
PLM3-1_50_b1_sep16_scaffold_740_29
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31070..33271
DNA (2202bp) protein (734aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UL08_MYXSD
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
Displaying items 1-30 of 89 in total

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