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PLM3-1_50_b1_sep16_scaffold_881

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_881_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1..1761
DNA (1761bp) protein (587aa)
Uncharacterized protein Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZ46_DICTD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2212..3552)
DNA (1341bp) protein (447aa)
Helix-turn-helix domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A931_THECD
helix-turn-helix domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_881_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3593..4204)
DNA (612bp) protein (204aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H5_CONWI
tRNA/rRNA methyltransferase SpoU
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(4270..4650)
DNA (381bp) protein (127aa)
50S ribosomal protein L20 Tax=Eggerthella sp. CAG:1427 RepID=R5FPA8_9ACTN
50S ribosomal protein L20P
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4732..5397)
DNA (666bp) protein (222aa)
Translation initiation factor IF-3 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H9_CONWI
translation initiation factor IF-3
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5639..8755)
DNA (3117bp) protein (1039aa)
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonyl-tRNA synthetase (Fragment) Tax=uncultured bacterium RepID=F8UVN5_9BACT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9299..10315
DNA (1017bp) protein (339aa)
Putative ribonuclease BN Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRY9_ACIC1
putative ribonuclease BN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_8
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(10287..11249)
DNA (963bp) protein (321aa)
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13)
Peptidase U61 LD-carboxypeptidase A Tax=Firmicutes bacterium CAG:238 RepID=R6DUU6_9FIRM
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:CDA91415.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
PLM3-1_50_b1_sep16_scaffold_881_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11258..14587)
DNA (3330bp) protein (1110aa)
Subtilisin-like serine protease Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCK6_9FIRM
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14597..15523)
DNA (927bp) protein (309aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_11
unknown

Not on your lists

comp(16142..16510)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_881_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16809..17234
DNA (426bp) protein (142aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17542..18648)
DNA (1107bp) protein (369aa)
alcohol dehydrogenase Tax=Patulibacter americanus RepID=UPI0003B5E6AD
alcohol dehydrogenase GroES domain protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18653..19033)
DNA (381bp) protein (127aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Frankia sp. CN3 RepID=G6HH23_9ACTO
Putative quinone binding protein {ECO:0000313|EMBL:CEL13799.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_881_15
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19094..19990)
DNA (897bp) protein (299aa)
WD40-like Beta Propeller Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
WD40-like Beta Propeller {ECO:0000313|EMBL:EEK80289.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus R309803.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_881_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20340..20897)
DNA (558bp) protein (186aa)
cupin Tax=Patulibacter americanus RepID=UPI0003B54AEC
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_881_17
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21006..21785
DNA (780bp) protein (260aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI0003655393
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW11073.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying 17 items

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