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PLM3-1_50_b1_sep16_scaffold_944

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_944_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..438)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI000369E343
Appr-1-p processing domain-containing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ACS18005.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM3-1_50_b1_sep16_scaffold_944_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(435..1055)
DNA (621bp) protein (207aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
dihydrodipicolinate reductase Tax=Patulibacter americanus RepID=UPI0003B6811A
PLM3-1_50_b1_sep16_scaffold_944_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1226..2512)
DNA (1287bp) protein (429aa)
Peptidase M16 domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE35_CONWI
peptidase M16 domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_4
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

comp(2604..5090)
DNA (2487bp) protein (829aa)
polyribonucleotide nucleotidyltransferase Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034B85A1
polynucleotide phosphorylase
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3-1_50_b1_sep16_scaffold_944_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(5196..5465)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE30_CONWI
30S ribosomal protein S15
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5562..6137
DNA (576bp) protein (192aa)
Signal peptidase I (EC:3.4.21.89)
Probable signal peptidase I-2 Tax=Bacteria RepID=LEP2_SYNY3
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6250..7602
DNA (1353bp) protein (451aa)
hypothetical protein Tax=Longispora albida RepID=UPI000362FF40
putative gamma-glutamyltranspeptidase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7619..8422)
DNA (804bp) protein (268aa)
ABC-2 type transporter Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PP39_KRIFD
ABC transporter
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8568..9344)
DNA (777bp) protein (259aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036FCACA
ABC-2 type transporter
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9341..10282)
DNA (942bp) protein (314aa)
Putative ABC transporter ATP-binding protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VW19_9ACTO
putative ABC transporter ATP-binding protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_944_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10320..11195)
DNA (876bp) protein (292aa)
riboflavin kinase Tax=Salinispora pacifica RepID=UPI00036C4524
riboflavin biosynthesis protein RibF
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_944_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11361..11819)
DNA (459bp) protein (153aa)
tRNA pseudouridine synthase B Tax=Methylohalobius crimeensis RepID=UPI0003B763A8
pseudouridine synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_944_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12018..13034)
DNA (1017bp) protein (339aa)
Phosphoesterase RecJ domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE26_CONWI
phosphoesterase RecJ domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13009..13311)
DNA (303bp) protein (101aa)
ribosome-binding factor A Tax=Patulibacter americanus RepID=UPI0003B68C95
ribosome-binding factor A
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_944_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13361..13663)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE24_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13676..15655)
DNA (1980bp) protein (660aa)
Translation initiation factor IF-2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE23_CONWI
translation initiation factor IF-2
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15684..17102)
DNA (1419bp) protein (473aa)
NusA antitermination factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE22_CONWI
NusA antitermination factor
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17099..17548)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B4C869
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17655..18092)
DNA (438bp) protein (146aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=DTD_ROSCS
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_20
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18148..21096
DNA (2949bp) protein (983aa)
Type II secretion system protein E Tax=Thermus aquaticus Y51MC23 RepID=B7A8U2_THEAQ
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:KIG18537.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
type II secretion system protein E
PLM3-1_50_b1_sep16_scaffold_944_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21093..21521)
DNA (429bp) protein (143aa)
TPR containing protein Tax=Patulibacter medicamentivorans RepID=H0EA20_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21652..23838)
DNA (2187bp) protein (729aa)
Transglutaminase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE17_CONWI
transglutaminase
Transglutaminase domain protein {ECO:0000313|EMBL:ADB51633.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_944_23
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23855..24913)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7V7_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY98479.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3-1_50_b1_sep16_scaffold_944_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25059..26030)
DNA (972bp) protein (324aa)
Regulatory protein Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QPK3_9ACTO
ATPase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_25
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(26027..27190)
DNA (1164bp) protein (388aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE14_CONWI
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3-1_50_b1_sep16_scaffold_944_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27201..27437)
DNA (237bp) protein (79aa)
DNA-directed RNA polymerase subunit omega Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE13_CONWI
DNA-directed RNA polymerase subunit omega
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_27
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27434..28177)
DNA (744bp) protein (248aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Patulibacter medicamentivorans RepID=H0EA23_9ACTN
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(28287..28622)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE10_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_29
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(28702..29577)
DNA (876bp) protein (292aa)
Dihydroorotate dehydrogenase Tax=Bacillus pseudofirmus (strain OF4) RepID=D3FTA6_BACPE
pyrD; dihydroorotate dehydrogenase family protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_944_30
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(29574..30260)
DNA (687bp) protein (229aa)
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE08_CONWI
dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain protein
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying items 1-30 of 31 in total

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