ggKbase home page

PLM3-1_50_b1_sep16_scaffold_6260

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_6260_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..1454)
DNA (1452bp) protein (484aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
prolyl-tRNA synthetase (EC:6.1.1.15)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1546..2580)
DNA (1035bp) protein (345aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZF0_CONWI
PLM3-1_50_b1_sep16_scaffold_6260_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2609..3316)
DNA (708bp) protein (236aa)
membrane-associated zinc metalloprotease (EC:3.4.24.-)
Membrane-associated zinc metalloprotease bin=GWA2_Deltaproteo_65_63 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3387..3794)
DNA (408bp) protein (136aa)
Membrane-associated zinc metalloprotease Tax=Patulibacter medicamentivorans RepID=H0E776_9ACTN
zinc metalloprotease
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3791..4843)
DNA (1053bp) protein (351aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
hypothetical protein Tax=Anaeromusa acidaminophila RepID=UPI00037D69B7
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4879..5682)
DNA (804bp) protein (268aa)
Phosphatidate cytidylyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
phosphatidate cytidylyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5810..6466)
DNA (657bp) protein (219aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW64_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6515..7078)
DNA (564bp) protein (188aa)
Ribosome-recycling factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7087..7848)
DNA (762bp) protein (254aa)
uridylate kinase (EC:2.7.4.22)
uridylate kinase Tax=Patulibacter americanus RepID=UPI0003B4720C
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7976..8785)
DNA (810bp) protein (270aa)
Elongation factor Ts Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=EFTS_ALKEH
tsf; elongation factor Ts
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_6260_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(8916..9443)
DNA (528bp) protein (176aa)
30S ribosomal protein S2 Tax=Patulibacter medicamentivorans RepID=H0E783_9ACTN
30S ribosomal protein S2
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 11 items

View Taxonomy