ggKbase home page

PLM3-1_50_b1_sep16_scaffold_1146_9

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(7069..9078)

Top 3 Functional Annotations

Value Algorithm Source
PutativeDNA-binding protein Tax=Patulibacter medicamentivorans RepID=H0E2I1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 699.0
  • Bit_score: 425
  • Evalue 8.20e-116
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 692.0
  • Bit_score: 418
  • Evalue 2.20e-114
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 544.0
  • Bit_score: 942
  • Evalue 2.10e-271

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGTCGCACGACGCCGACAAGCTCATCCGACAGCTCTCGCTCGTCGCGTTCCTGATGGCCGAGCGTCGCCTGCTCACCGCACGCGACGTGAAGTCGAACGTCGAGGGGTACAGCGAGATGTCCGACGAGGCGTTCGCGCGCCGTTTCTACTCCGATCGCGCGGAGCTGACCGCTCTCGGTGTCCCGCTGCAGTCCCAGCGCGACGAGTTCACGGGAGAAGAGCTGTACACGCTTCGCTCCGAGCACTACTTCCTCGAGCGGCTCGAGCTGGACGACGACGAGCTCGCCGCGCTCCAGACCGCTCTCTACTACCTCGAGGGGAAGTTCGCCTACGCGGAGCCCTTGCGTCTGGCCCTCCAGAACCTCGCGCTCGGACGCTCCGGCTTCCGGGAGCCGGCGACGGAGACGGCAGAGCGCGTTCGCGTCAGCGCGCCCGACTACTCGCCCGAGCTCGCGGGCCGCCTGTCGAAGCTCGAGTCGGCGATCTCGAAGCAGCGGACGGTTCGCTTCGGCTACTGGAGTCCACGACGCGCCAGACCCGGCGAGCGGACGGTCAACCCCTATGCGCTTCGGCTCGACGACGGCAACTGGTACGTCATCGGTCACGACCTCGAGCGCCGCACCGAACGGACCTTCCGGGTCTCACGCATCCGTGGAGACATCCGGTTCGCCACCCGGCGCGAGCGCGACTTCCGGGTCCCCGCCGACTTCGACGTGGAGAGACACCGGATACCCAGGCCGTGGCAGATCGGAGAAACGGTGGCGACGGCGCGTATCTCCGTCTCGGACGACACCGCGTGGTGGGTCGAGCGGACGCTCTCCGACGCCGGGACCGTCGAGGACGGAGTGTTCGCAACCGAGTACGCGAACGTCGACCTGCTCGCAGGATGGATCCTGCGCCAGAACGGCCGTGCCGTGCCCATCGAGCCCGATGAGCTCGTGGAGGCGGTCTCGAACGGGCTCTCGCAGCTCGCAGAGGCACACACCGGACCCGCGCCCGCGGCGGCCGGGGCGAAGCGTGCCGATCCGCGCCGGCCACTGACCGAGAGGCCGCAGGGGCCGGTCGCCCCGGAACGCTTCGGTGTCCTGCAGGCGCTCCTCGCACACCTTCTGACCGCCTGTGGTGACGAGCGAGCCGCGGTGATCGACGCCGAGGAGCTCGCGTCGCGGTTCTCGATTCCCCTCGAGGAGCTCCAGGATCATCTCTCGCTCCTCAATCTCGTCAACTTCGGCGGCGGCTGCTACGCGGTGTACGCGATGCACGACGGCGACGTCGTACGCGTCGACAAGGAGCTCTACGGAGACGTTTTCAGGCGCCCGCCGAAGCTCACTCCGCTGGAGGCGCGCGCGATCCGGCTGGCCATCGAGTACGTCGGGCCGACGATCGCGGCAGACGCCCACTCTCCCCTGAAGCGAGTTAGGAAGAAGCTCGAGGAGACCTTCGGCCGCTTCGATCTCGTCGGGACGCCGGAGCCCAGGGACGCGTCCGACGAGGAGGCCCTCGTGAAGGTCCTGAGCGAGGCTGCAGAGAAGCGGCTCGTCGTCGAGATCGAGTACCTGAAGGAGGGCGAAGAGAGCCCCTCGCCCCGCCGGGTCGAGCCGTACACGATCGAGCGCGAGCTGCCCGTGTGGCGAGTGCACACCTGGGATCAGACGGTGGACGCCGCGCGTACGTTCCGCCTCGACCGAATGCGGTCGGCCGCGCTGACGACCACCTCCTTCGAGCCCCGAGACGGGTTCGACCCGTCCTACCTGCGGAACCCCCGGGTCGCACGCCTCCTCCATTCGCCGACGATTGCGCGCTGGAAGCTCGAGCGCGGGGCGAGCGCGCTGACGGACGGCTCGGCGCTCGCCGACGTTCCGTACAAGACGGAAGACTGGCTCCTGTCGGAGATTCTCGCGGACAGGGGCGAGACGACGGTCCTCGAGCCCCAGCGGCTCCGCGACCTCGTCGCCAAGAGAGCGCGACGGCTGAAGCGCGAGCTCGGTCGCGTCCCCGCGCGCCGCTGA
PROTEIN sequence
Length: 670
MSHDADKLIRQLSLVAFLMAERRLLTARDVKSNVEGYSEMSDEAFARRFYSDRAELTALGVPLQSQRDEFTGEELYTLRSEHYFLERLELDDDELAALQTALYYLEGKFAYAEPLRLALQNLALGRSGFREPATETAERVRVSAPDYSPELAGRLSKLESAISKQRTVRFGYWSPRRARPGERTVNPYALRLDDGNWYVIGHDLERRTERTFRVSRIRGDIRFATRRERDFRVPADFDVERHRIPRPWQIGETVATARISVSDDTAWWVERTLSDAGTVEDGVFATEYANVDLLAGWILRQNGRAVPIEPDELVEAVSNGLSQLAEAHTGPAPAAAGAKRADPRRPLTERPQGPVAPERFGVLQALLAHLLTACGDERAAVIDAEELASRFSIPLEELQDHLSLLNLVNFGGGCYAVYAMHDGDVVRVDKELYGDVFRRPPKLTPLEARAIRLAIEYVGPTIAADAHSPLKRVRKKLEETFGRFDLVGTPEPRDASDEEALVKVLSEAAEKRLVVEIEYLKEGEESPSPRRVEPYTIERELPVWRVHTWDQTVDAARTFRLDRMRSAALTTTSFEPRDGFDPSYLRNPRVARLLHSPTIARWKLERGASALTDGSALADVPYKTEDWLLSEILADRGETTVLEPQRLRDLVAKRARRLKRELGRVPARR*