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PLM3-1_50_b1_sep16_scaffold_1146

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1146_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(88..285)
DNA (198bp) protein (66aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1146_2
unknown

Not on your lists

541..1032
DNA (492bp) protein (164aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1146_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1607..2614)
DNA (1008bp) protein (336aa)
qor_1; NADPH:quinone reductase 1 (EC:1.6.5.5)
Alcohol dehydrogenase zinc-binding domain protein bin=GWB2_Deltaproteobacteria_65_81 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_4

Not on your lists

2628..3617
DNA (990bp) protein (330aa)
Iron-sulfur cluster binding protein Tax=uncultured bacterium W5-102b RepID=H9BWK0_9BACT
Iron-sulfur cluster binding protein {ECO:0000313|EMBL:AFD03172.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium W5-102b.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1146_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3614..4252
DNA (639bp) protein (213aa)
Two-component sensor kinase, probably involved in phosphate sensing Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RF9_SYMTH
two-component sensor kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4412..5086)
DNA (675bp) protein (225aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5112..5576)
DNA (465bp) protein (155aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5576..6964)
DNA (1389bp) protein (463aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7069..9078)
DNA (2010bp) protein (670aa)
PutativeDNA-binding protein Tax=Patulibacter medicamentivorans RepID=H0E2I1_9ACTN
transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9159..9506)
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9678..10244)
DNA (567bp) protein (189aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10241..10648)
DNA (408bp) protein (136aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10658..12391)
DNA (1734bp) protein (578aa)
Aldehyde Dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A1K7_THECD
aldehyde dehydrogenase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_14
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12411..13517
DNA (1107bp) protein (369aa)
Acetyl-CoA acetyltransferase Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6J7_9BACI
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EGL83058.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
atoB; acetyl-CoA acetyltransferase
PLM3-1_50_b1_sep16_scaffold_1146_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13764..14624
DNA (861bp) protein (287aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6I8_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14708..15295
DNA (588bp) protein (196aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15292..15996
DNA (705bp) protein (235aa)
Putative OmpR family two-component response regulator Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6B6_CALAS
putative OmpR family two-component response regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16014..17420
DNA (1407bp) protein (469aa)
atm:ANT_22650 two-component sensor histidine kinase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1146_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17460..18923
DNA (1464bp) protein (488aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=QUEA_RUBXD
queuosine biosynthesis protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19033..20199
DNA (1167bp) protein (389aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWD4_RUBXD
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20196..20609
DNA (414bp) protein (138aa)
Preprotein translocase, YajC subunit Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3WVN2_9ACTO
preprotein translocase subunit YajC
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21314..21601)
DNA (288bp) protein (96aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

21805..23361
DNA (1557bp) protein (519aa)
Protein-export membrane protein SecD Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY6_CONWI
protein-export membrane protein SecD
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

23345..23680
DNA (336bp) protein (112aa)
Putative uncharacterized protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI80_DESK7
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

23714..25378
DNA (1665bp) protein (555aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
2-octaprenylphenol hydroxylase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWC7_RUBXD
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

25483..26175
DNA (693bp) protein (231aa)
transcriptional regulator Tax=Patulibacter americanus RepID=UPI0003B79AB7
two component transcriptional regulator
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1146_27
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26239..26412)
DNA (174bp) protein (58aa)
Putative uncharacterized protein Tax=Sphingobium sp. SYK-6 RepID=G2IMW1_9SPHN
Glyoxalase {ECO:0000313|EMBL:KGF70931.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1146_28
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27114..28376)
DNA (1263bp) protein (421aa)
FAD binding domain in molybdopterin dehydrogenase Tax=Bordetella pertussis RepID=V9AQG9_BORPT
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:ETH89712.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis STO1-CHOC-0019.;"
(2Fe-2S)-binding domain-containing protein
PLM3-1_50_b1_sep16_scaffold_1146_29
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(28373..28771)
DNA (399bp) protein (133aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_1146_30
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(28722..30572)
DNA (1851bp) protein (617aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=CSP1_4_Chloroflexi
Displaying items 1-30 of 34 in total

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