ggKbase home page

PLM3-1_50_b1_sep16_scaffold_2883_19

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(10387..10740)

Top 3 Functional Annotations

Value Algorithm Source
Putative deoxyribonuclease RhsC {ECO:0000313|EMBL:KJQ74055.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJQ74055.1};; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 114.0
  • Bit_score: 115
  • Evalue 4.40e-23
Uncharacterized protein Tax=Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) RepID=B6VN25_PHOAA similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 113.0
  • Bit_score: 108
  • Evalue 3.90e-21
Rhs-family protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 113.0
  • Bit_score: 112
  • Evalue 5.80e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptococcus mitis → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
ATGGATGACGACGGGTTTCCGCGAGTAGGTTCGAGCGCCCGAACGCTGGGCGTCCGAGACGATGAGAGCGACATCGAGGTGGACGATGACGGCCTGGTTCATCCCTACACGGGAGGCATGTCGGTAGGCCTGCGCCCAGAAGATCTGCCGGAACACCGCAGGCCTCAAGCGTTCGGCGGCACTGGCGATGACCCGCTCTGGGTTATTGAGGAATCCGACCTCGTTGACGGTCTCCGGTATACGGAGGACGGGGAGCTTCCCGGGCACGGCTTCATCGAACCCGCCGGGATAATGCGGCTGGATGAATACGAGGATCTCCTCGCTCTGACTCGCGAGGACTGGCGGCCGGCCTAA
PROTEIN sequence
Length: 118
MDDDGFPRVGSSARTLGVRDDESDIEVDDDGLVHPYTGGMSVGLRPEDLPEHRRPQAFGGTGDDPLWVIEESDLVDGLRYTEDGELPGHGFIEPAGIMRLDEYEDLLALTREDWRPA*