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PLM3-1_50_b1_sep16_scaffold_2883

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2883_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

958..1272
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECB0_9CHLR
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2883_2
unknown

Not on your lists

comp(1526..1795)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_3
unknown

Not on your lists

comp(1852..1998)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2037..2798
DNA (762bp) protein (254aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B5A1CE
Collagen-like surface protein, putative {ECO:0000313|EMBL:EYF04872.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
triple helix repeat-containing collagen
PLM3-1_50_b1_sep16_scaffold_2883_5
unknown

Not on your lists

2770..2871
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_6
unknown

Not on your lists

3267..3824
DNA (558bp) protein (186aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_7
Prevotella multisaccharivorax, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4151..5371)
DNA (1221bp) protein (407aa)
Peptidase S41 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8N851_9BACT
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:EGN56489.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;"
PLM3-1_50_b1_sep16_scaffold_2883_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5477..5680
DNA (204bp) protein (68aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_2883_9
unknown

Not on your lists

comp(5774..5926)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_10
unknown

Not on your lists

comp(5936..6133)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_11
unknown

Not on your lists

comp(6133..6450)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_12
unknown

Not on your lists

comp(6568..6825)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_13
unknown

Not on your lists

7337..7645
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_14
unknown

Not on your lists

comp(7642..8148)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_15
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8228..8422
DNA (195bp) protein (65aa)
Phage transcriptional regulator, AlpA Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ18_PARL1
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABS65151.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3-1_50_b1_sep16_scaffold_2883_16
unknown

Not on your lists

8419..8625
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_17
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8622..9863
DNA (1242bp) protein (414aa)
Uncharacterized protein Tax=Gordonia aichiensis NBRC 108223 RepID=L7KSM2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC50952.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_2883_18
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9860..10096
DNA (237bp) protein (79aa)
VRR-NUC domain-containing protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I8Z1_9PSEU
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3-1_50_b1_sep16_scaffold_2883_19
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10387..10740)
DNA (354bp) protein (118aa)
Putative deoxyribonuclease RhsC {ECO:0000313|EMBL:KJQ74055.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJQ74055.1};; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
Uncharacterized protein Tax=Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) RepID=B6VN25_PHOAA
Rhs-family protein
PLM3-1_50_b1_sep16_scaffold_2883_20
unknown

Not on your lists

11125..11562
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_21
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11552..12613
DNA (1062bp) protein (354aa)
Putative integrase Tax=Gordonia aichiensis NBRC 108223 RepID=L7KQQ7_9ACTO
Putative integrase {ECO:0000313|EMBL:GAC50949.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
phage integrase family protein
PLM3-1_50_b1_sep16_scaffold_2883_trna_1
unknown

Not on your lists

comp(12680..12752)
DNA (73bp)
transferRNA Arg
PLM3-1_50_b1_sep16_scaffold_2883_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12743..13546)
DNA (804bp) protein (268aa)
glycine cleavage system t (aminomethyltransferase) protein (EC:2.1.2.10)
Putative Folate-binding protein YgfZ Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7P2_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2883_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13565..14170
DNA (606bp) protein (202aa)
molybdopterin-binding oxidoreductase; K07147 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
molybdopterin binding oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2883_24
unknown

Not on your lists

14160..14351
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2883_25
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

14697..16442
DNA (1746bp) protein (582aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002ECB567
Nitrite reductase {ECO:0000313|EMBL:KIY12368.1}; species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
Rieske (2Fe-2S) domain-containing protein
PLM3-1_50_b1_sep16_scaffold_2883_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16684..18312)
DNA (1629bp) protein (543aa)
60 kDa chaperonin Tax=Patulibacter medicamentivorans RepID=H0E7G5_9ACTN
chaperonin GroEL
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2883_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18342..18674)
DNA (333bp) protein (111aa)
10 kDa chaperonin Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2T1_CONWI
chaperonin Cpn10
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2883_28
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18837..19292
DNA (456bp) protein (152aa)
Hydrolase, NUDIX family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08XT2_STIAD
nudix family hydrolase
Hydrolase, NUDIX family {ECO:0000313|EMBL:ADO73444.1}; MutT/nudix family protein {ECO:0000313|EMBL:EAU65264.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3-1_50_b1_sep16_scaffold_2883_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19306..19656
DNA (351bp) protein (117aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B4F1E3
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 42 in total

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