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PLM3-1_50_b1_sep16_scaffold_5279

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_5279_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(3..695)
DNA (693bp) protein (231aa)
short-chain dehydrogenase/reductase (EC:1.-.-.-) bin=bin8_Chloro species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin8_Chloro organism_group=Chloroflexi
short-chain dehydrogenase/reductase (EC:1.-.-.-)
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_5279_2
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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750..2195
DNA (1446bp) protein (482aa)
GntR family transcriptional regulator Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI000382B6BC
GntR family transcriptional regulator {ECO:0000313|EMBL:KJK58533.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
GntR family transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_5279_3
unknown

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comp(2177..2602)
DNA (426bp) protein (142aa)
pyridoxal 5'-phosphate synthase
PLM3-1_50_b1_sep16_scaffold_5279_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(2640..3584)
DNA (945bp) protein (315aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_5279_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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3846..5201
DNA (1356bp) protein (452aa)
Transcription termination factor Rho bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transcription termination factor Rho
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_5279_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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5502..6743
DNA (1242bp) protein (414aa)
Peptidase M23 family protein bin=GWC2_Chloroflexi_73_18 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
lipoprotein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_5279_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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6799..8109
DNA (1311bp) protein (437aa)
GTPase obg bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GTPase obg
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_5279_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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8079..8747
DNA (669bp) protein (223aa)
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_5279_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

8744..9178
DNA (435bp) protein (145aa)
iojap family protein; K09710 ribosome-associated protein bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
iojap family protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_5279_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

9268..9522
DNA (255bp) protein (85aa)
id=4832809 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_5279_11
unknown

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9628..10077
DNA (450bp) protein (150aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_5279_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10102..10485)
DNA (384bp) protein (128aa)
DNA polymerase III, delta subunit bin=GWC2_Chloroflexi_73_18 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying 12 items

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