ggKbase home page

PLM3-1_50_b1_sep16_scaffold_1966

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1966_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
HAD-superfamily hydrolase, subfamily IIA bin=GWC2_Chloroflexi_73_18 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
HAD-superfamily hydrolase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_1966_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

750..1532
DNA (783bp) protein (261aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
enoyl-(acyl-carrier-protein)-like protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_3
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1543..1965)
DNA (423bp) protein (141aa)
MedDCM-OCT-S36-C22-cds12 Tax=Candidatus Actinomarina minuta RepID=S5DWT2_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_50_b1_sep16_scaffold_1966_4
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2277..2846)
DNA (570bp) protein (190aa)
Disulfide bond formation protein Tax=Planococcus halocryophilus Or1 RepID=M3FBV4_9BACL
disulfide oxidoreductase
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3-1_50_b1_sep16_scaffold_1966_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2892..3365)
DNA (474bp) protein (158aa)
Ferric uptake regulation protein bin=GWC2_Chloroflexi_73_18 species=Actinoplanes sp. genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
FUR family nickel uptake regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3718..4392
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T4_SPHTD
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4393..5268)
DNA (876bp) protein (292aa)
iron permease FTR1; K07243 high-affinity iron transporter bin=bin8_Chloro species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
iron permease FTR1
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5370..6095)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000369B5B5
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6092..7015)
DNA (924bp) protein (308aa)
ABC transporter Tax=Streptomyces vitaminophilus RepID=UPI00036305CD
putative ABC transporter ATP-binding protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1966_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7012..7932)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000379F514
putative integral membrane protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7929..8822)
DNA (894bp) protein (298aa)
ABC transporter related protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A335_THECD
ABC transporter
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1966_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8885..10927)
DNA (2043bp) protein (681aa)
Diguanylate cyclase with GAF sensor bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
diguanylate cyclase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_1966_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11047..12786)
DNA (1740bp) protein (580aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
serine/threonine protein kinase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_1966_trna_1
unknown

Not on your lists

comp(12904..12976)
DNA (73bp)
transferRNA Gly
PLM3-1_50_b1_sep16_scaffold_1966_14
unknown

Not on your lists

13021..13188
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 15 items

View Taxonomy