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PLM3-1_50_b1_sep16_scaffold_3481

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_3481_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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1..444
DNA (444bp) protein (148aa)
HhH-GPD family protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9V3_9ACTO
HhH-GPD family protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_3481_2
Microbotryum violaceum, Microbotryum, Microbotryales, Microbotryomycetes, Basidiomycota, Fungi

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comp(255..1031)
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Microbotryum violaceum (strain p1A1 Lamole) RepID=U5HFF9_USTV1
Uncharacterized protein {ECO:0000313|EMBL:KDE03705.1, ECO:0000313|EnsemblFungi:MVLG_05836T0}; species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Microbotryales; Microbotryaceae; Microbotryum.;" source="Microbotryum violaceum (strain p1A1 Lamole) (Anther smut fungus); (Ustilago violacea).;"
collagen like triple helix protein
PLM3-1_50_b1_sep16_scaffold_3481_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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1229..1936
DNA (708bp) protein (236aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] bin=bin8_Chloro species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
GTP cyclohydrolase I (EC:3.5.4.16)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_3481_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1953..3038)
DNA (1086bp) protein (362aa)
Transcriptional regulatory protein, MarR family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FLF9_STIAD
MarR family transcriptional regulator
Transcriptional regulatory protein, MarR family {ECO:0000313|EMBL:ADO73051.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3-1_50_b1_sep16_scaffold_3481_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3154..4143
DNA (990bp) protein (330aa)
Putative Daunorubicin/doxorubicin resistance ATP-binding protein DrrA Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWR3_9ACTO
Putative Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:CCH16010.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
daunorubicin resistance ABC transporter ATPase subunit
PLM3-1_50_b1_sep16_scaffold_3481_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4140..4967
DNA (828bp) protein (276aa)
ABC-2 type transporter Tax=Frankia sp. EUN1f RepID=D3CZ71_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ABC transporter
PLM3-1_50_b1_sep16_scaffold_3481_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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5093..5497
DNA (405bp) protein (135aa)
methylmalonyl-CoA mutase domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] bin=bin8_Chloro species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
methylmalonyl-CoA mutase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_3481_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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5499..6509
DNA (1011bp) protein (337aa)
LAO/AO transport system ATPase bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LAO/AO transport system ATPase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_3481_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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7259..7726
DNA (468bp) protein (156aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036A34DA
major Facilitator Superfamily protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_3481_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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8351..9514
DNA (1164bp) protein (388aa)
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2) bin=bin8_Chloro species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2)
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_3481_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9523..9882)
DNA (360bp) protein (120aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Methanofollis liminatans DSM 4140 RepID=J1L0H4_9EURY
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_3481_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(10047..10802)
DNA (756bp) protein (252aa)
id=14629623 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_3481_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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10867..11010
DNA (144bp) protein (48aa)
Chromosome undetermined SCAF7642, whole genome shotgun sequence bin=GWC2_Chloroflexi_73_18 species=Tetraodon nigroviridis genus=Tetraodon taxon_order=Tetraodontiformes taxon_class=Actinopterygii phylum=Chordata tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
mmgA; degradative acetoacetyl-CoA thiolase
Tax=RBG_16_RIF_CHLX_72_14_curated
Displaying 13 items

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