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PLM3-1_50_b1_sep16_scaffold_2636

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2636_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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3..1106
DNA (1104bp) protein (368aa)
2-isopropylmalate synthase/homocitrate synthase family protein bin=GWC2_Chloroflexi_73_18 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
alpha-isopropylmalate/homocitrate synthase transferase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

1112..1663
DNA (552bp) protein (184aa)
2-isopropylmalate synthase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_3
unknown

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comp(1756..2403)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2636_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(2410..2682)
DNA (273bp) protein (91aa)
transglycosylase-associated protein bin=bin8_Chloro species=Serratia sp. DD3 genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
Transglycosylase-associated protein
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_2636_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2800..3159
DNA (360bp) protein (120aa)
Transcriptional regulator, XRE family bin=GWC2_Chloroflexi_73_18 species=Mycobacterium gilvum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transcriptional regulator
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_6
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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comp(3290..3727)
DNA (438bp) protein (146aa)
hypothetical protein bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3-1_50_b1_sep16_scaffold_2636_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

3874..4461
DNA (588bp) protein (196aa)
Transcriptional regulator, PadR family Tax=Frankia sp. (strain CcI3) RepID=Q2J635_FRASC
PadR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

4556..6178
DNA (1623bp) protein (541aa)
Conserved hypothetical membrane protein bin=GWC2_Chloroflexi_73_18 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
sensory box/GGDEF family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

6269..7120
DNA (852bp) protein (284aa)
Prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51] bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
prephenate dehydratase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(7411..7833)
DNA (423bp) protein (141aa)
mscL; large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel bin=bin8_Chloro species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
large-conductance mechanosensitive channel
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_2636_11
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(7842..8246)
DNA (405bp) protein (135aa)
Ferredoxin Tax=Labrenzia RepID=U7G9F2_9RHOB
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM3-1_50_b1_sep16_scaffold_2636_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

8374..10062
DNA (1689bp) protein (563aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Demetria terragena genus=Demetria taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ATPase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2636_13
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

10071..11060
DNA (990bp) protein (330aa)
Phosphoesterase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CJ10_THET1
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ACZ43730.1}; Flags: Precursor;; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_50_b1_sep16_scaffold_2636_14
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11057..11569
DNA (513bp) protein (171aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000375E9C3
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66606.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
Displaying 14 items

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