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PLM3-1_50_b1_sep16_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_183_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..1287)
DNA (1287bp) protein (429aa)
ATP-dependent DNA helicase (UvrD/REP) bin=GWC2_Chloroflexi_73_18 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ATP-dependent DNA helicase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_2
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1528..2949
DNA (1422bp) protein (474aa)
Hyalin Tax=Chloroflexus RepID=A9WIM4_CHLAA
Uncharacterized protein {ECO:0000313|EMBL:EYR65054.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hyalin
PLM3-1_50_b1_sep16_scaffold_183_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

2976..4826
DNA (1851bp) protein (617aa)
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
UvrABC system protein C
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_183_4
unknown

Not on your lists

comp(4882..5397)
DNA (516bp) protein (172aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_183_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5522..6895
DNA (1374bp) protein (458aa)
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=bin8_Chloro species=Clostridium sp. CAG:306 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
secD; protein-export membrane protein SecD
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_183_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

6888..8081
DNA (1194bp) protein (398aa)
Protein translocase subunit SecF bin=GWC2_Chloroflexi_73_18 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protein-export membrane protein SecF
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_183_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

8121..9908
DNA (1788bp) protein (596aa)
Single-stranded-DNA-specific exonuclease RecJ bin=GWC2_Chloroflexi_73_18 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
single-stranded-DNA-specific exonuclease RecJ
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_183_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

9905..11155
DNA (1251bp) protein (417aa)
WD40 domain-containing protein bin=GWC2_Chloroflexi_73_18 species=Saccharomonospora xinjiangensis genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
WD40 domain-containing protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

11166..12050
DNA (885bp) protein (295aa)
Orotidine 5'-phosphate decarboxylase bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
orotidine 5'-phosphate decarboxylase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12064..12312
DNA (249bp) protein (83aa)
Sec-independent protein translocase protein TatA bin=GWC2_Chloroflexi_73_18 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
tatA; Sec-independent protein translocase protein tatA/E-like protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_183_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12333..13121
DNA (789bp) protein (263aa)
Sec-independent protein translocase, TatC subunit bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Sec-independent protein translocase subunit TatC
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_183_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

13118..14023
DNA (906bp) protein (302aa)
hypothetical protein bin=bin8_Chloro species=Saccharothrix espanaensis genus=Saccharothrix taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_183_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

14040..15383
DNA (1344bp) protein (448aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

15386..16198
DNA (813bp) protein (271aa)
hypothetical protein; K09762 hypothetical protein bin=bin8_Chloro species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Sporulation regulator WhiA
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_183_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

16191..16985
DNA (795bp) protein (265aa)
Triosephosphate isomerase bin=GWC2_Chloroflexi_73_18 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
tpiA; triosephosphate isomerase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_183_16
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

16993..18600
DNA (1608bp) protein (536aa)
GpmI; phosphoglyceromutase (EC:5.4.2.1)
Phosphoglycerate mutase bin=GWC2_Chloroflexi_73_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_17
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

18651..18884
DNA (234bp) protein (78aa)
Preprotein translocase, SecG subunit bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
secG; preprotein translocase, SecG subunit
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_183_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

18928..20670
DNA (1743bp) protein (581aa)
Putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
family 5 extracellular solute-binding protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_trna_1
unknown

Not on your lists

20689..20779
DNA (91bp)
transferRNA Leu
PLM3-1_50_b1_sep16_scaffold_183_trna_2
unknown

Not on your lists

20808..20889
DNA (82bp)
transferRNA Leu
PLM3-1_50_b1_sep16_scaffold_183_trna_3
unknown

Not on your lists

20957..21030
DNA (74bp)
transferRNA Val
PLM3-1_50_b1_sep16_scaffold_183_19
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21055..21861)
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Pandoraea sp. SD6-2 RepID=R7WX80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON10720.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
PLM3-1_50_b1_sep16_scaffold_183_20
unknown

Not on your lists

22040..22513
DNA (474bp) protein (158aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_183_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

22678..23247
DNA (570bp) protein (190aa)
LemA family protein bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_183_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

23270..24241
DNA (972bp) protein (324aa)
Protease HtpX homolog bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
HtpX-2 peptidase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_183_trna_4
unknown

Not on your lists

24591..24663
DNA (73bp)
transferRNA Phe
PLM3-1_50_b1_sep16_scaffold_183_trna_5
unknown

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24689..24761
DNA (73bp)
transferRNA Gly
PLM3-1_50_b1_sep16_scaffold_183_trna_6
unknown

Not on your lists

24787..24857
DNA (71bp)
transferRNA Gln
PLM3-1_50_b1_sep16_scaffold_183_trna_7
unknown

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24889..24970
DNA (82bp)
transferRNA Cys
PLM3-1_50_b1_sep16_scaffold_183_23
unknown

Not on your lists

25031..25588
DNA (558bp) protein (186aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy