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PLM3-1_50_b1_sep16_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_318_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

1..480
DNA (480bp) protein (160aa)
Putative RNA polymerase ECF-subfamily sigma factor Tax=Kitasatospora setae RepID=E4N401_KITSK
putative RNA polymerase ECF-subfamily sigma factor
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

477..1280
DNA (804bp) protein (268aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003636696
methylated-DNA-(protein)-cysteine S-methyltransferase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

1357..2373
DNA (1017bp) protein (339aa)
hypothetical protein SsomD4_18373 bin=GWC2_Chloroflexi_73_18 species=Streptomyces somaliensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2294..3556)
DNA (1263bp) protein (421aa)
Glucose-methanol-choline oxidoreductase bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
glucose-methanol-choline oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_318_5
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3519..4286)
DNA (768bp) protein (256aa)
Glucose-methanol-choline oxidoreductase bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
glucose-methanol-choline oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_318_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4288..5505)
DNA (1218bp) protein (406aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain protein bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

5568..6890
DNA (1323bp) protein (441aa)
acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine aminotransferase bin=GWC2_Chloroflexi_73_18 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7007..7201)
DNA (195bp) protein (65aa)
DNA-binding protein, excisionase family bin=GWC2_Chloroflexi_73_18 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
soxR; excisionase family DNA-binding protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

7429..8979
DNA (1551bp) protein (517aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGX7_THET1
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

8993..9697
DNA (705bp) protein (235aa)
Two component transcriptional regulator, winged helix family Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGX6_THET1
transcriptional regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_11
unknown

Not on your lists

9766..10008
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_318_12
unknown

Not on your lists

comp(10054..10254)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_318_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10465..12504
DNA (2040bp) protein (680aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12526..13242)
DNA (717bp) protein (239aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

13319..14416
DNA (1098bp) protein (366aa)
id=4356885 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_318_16
unknown

Not on your lists

14550..14744
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_318_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(14769..15707)
DNA (939bp) protein (313aa)
Putative endo-beta-1,3-glucanase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5F3_CALAS
putative endo-beta-1,3-glucanase
Putative endo-beta-1,3-glucanase {ECO:0000313|EMBL:BAM00491.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_50_b1_sep16_scaffold_318_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15704..18100)
DNA (2397bp) protein (799aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7I0_HERA2
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_318_19
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18093..18974)
DNA (882bp) protein (294aa)
sugar ABC transporter permease Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B706BB
sugar ABC transporter permease
Tax=CG_Anaero_03
PLM3-1_50_b1_sep16_scaffold_318_20
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18971..19900)
DNA (930bp) protein (310aa)
sugar ABC transporter permease Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B7BBC1
sugar ABC transporter permease
Tax=CG_Anaero_03
PLM3-1_50_b1_sep16_scaffold_318_21
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19990..21354)
DNA (1365bp) protein (455aa)
hypothetical protein Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B52BEA
sugar ABC transporter periplasmic protein
Tax=CG_Anaero_03
PLM3-1_50_b1_sep16_scaffold_318_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21429..22502)
DNA (1074bp) protein (358aa)
HTH-type transcriptional regulator celR Tax=Modestobacter marinus (strain BC501) RepID=I4ERM0_MODMB
celR; HTH-type transcriptional regulator celR
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_318_23
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

22855..23700
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9807 RepID=I4HEI0_MICAE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
PLM3-1_50_b1_sep16_scaffold_318_trna_2
unknown

Not on your lists

comp(23786..23858)
DNA (73bp)
transferRNA Arg
PLM3-1_50_b1_sep16_scaffold_318_24
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

24059..24262
DNA (204bp) protein (68aa)
Cold-shock domain family protein bin=GWC2_Chloroflexi_73_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cspC_[H]; cold-shock DNA-binding domain protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_25
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

24374..25657
DNA (1284bp) protein (428aa)
Glycosyl transferase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
group 1 glycosyl transferase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_26
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

25650..26747
DNA (1098bp) protein (366aa)
mannosyltransferase (EC:2.4.1.-)
Glycosyl transferase group 1 bin=GWC2_Chloroflexi_73_18 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_318_27
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

26744..27724
DNA (981bp) protein (327aa)
glycosidase bin=bin8_Chloro species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
glycosidase PH1107-like protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_318_28
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(27932..28678)
DNA (747bp) protein (249aa)
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
two component transcriptional regulator, winged helix family
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_318_29
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

29201..30604
DNA (1404bp) protein (468aa)
DNA modification methylase (EC:2.1.1.72) bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin8_Chloro organism_group=Chloroflexi
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying items 1-30 of 39 in total

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