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PLM3-1_50_b1_sep16_scaffold_891

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_891_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

1..369
DNA (369bp) protein (123aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

640..1104
DNA (465bp) protein (155aa)
SsrA-binding protein bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
smpB; SsrA-binding protein SmpB
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1408..2640)
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI30_ROSCS
major facilitator transporter
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3260..4309)
DNA (1050bp) protein (350aa)
Monooxygenase FAD-binding Tax=Chthoniobacter flavus Ellin428 RepID=B4D8E4_9BACT
Monooxygenase FAD-binding {ECO:0000313|EMBL:EDY17337.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
FAD-dependent monooxygenase
PLM3-1_50_b1_sep16_scaffold_891_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

4522..5526
DNA (1005bp) protein (335aa)
Alkaline phosphatase (EC:3.1.3.1)
hypothetical protein Tax=Longispora albida RepID=UPI00038264D3
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_50_b1_sep16_scaffold_891_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5646..7463
DNA (1818bp) protein (606aa)
Monovalent cation:H+ antiporter-2, CPA2 family Tax=Azospirillum sp. (strain B510) RepID=D3NTP6_AZOS1
monovalent cation:H+ antiporter-2, CPA2 family
Monovalent cation:H+ antiporter-2, CPA2 family {ECO:0000313|EMBL:BAI71775.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM3-1_50_b1_sep16_scaffold_891_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7460..9298)
DNA (1839bp) protein (613aa)
vancomycin resistance protein bin=bin8_Chloro species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
VanW family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_891_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9414..10454)
DNA (1041bp) protein (347aa)
Single-stranded nucleic acid binding R3H domain protein bin=GWC2_Chloroflexi_73_18 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Single-stranded nucleic acid binding R3H domain protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_891_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10457..11635)
DNA (1179bp) protein (393aa)
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
60 kDa inner membrane insertion protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11857..12186)
DNA (330bp) protein (110aa)
rnpA; ribonuclease P protein component (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5] bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ribonuclease P protein component
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_891_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12799..14193
DNA (1395bp) protein (465aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
dnaA; chromosomal replication initiation protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_12
unknown

Not on your lists

14255..14839
DNA (585bp) protein (195aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_891_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

14983..16086
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

16109..17245
DNA (1137bp) protein (379aa)
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
DNA replication and repair protein RecF
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_891_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

17275..17607
DNA (333bp) protein (111aa)
id=14628233 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_16
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

17699..19927
DNA (2229bp) protein (743aa)
id=14628232 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_17
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

19951..20673
DNA (723bp) protein (241aa)
S54 family peptidase (EC:3.4.21.-)
Putative peptidase, S54 (Rhomboid) family bin=GWC2_Chloroflexi_73_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_18
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

20681..21229
DNA (549bp) protein (183aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_19
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21226..22035)
DNA (810bp) protein (270aa)
Probable dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_891_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(22032..23546)
DNA (1515bp) protein (505aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWM2_RUBXD
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_891_21
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23540..25030)
DNA (1491bp) protein (497aa)
hypothetical protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_891_22
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

25063..27330
DNA (2268bp) protein (756aa)
putative integral membrane protein bin=bin8_Chloro species=Paenibacillus sp. P22 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
glycosyl transferase
Tax=RBG_16_RIF_CHLX_72_14_curated
Displaying 22 items

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