ggKbase home page

PLM3-1_50_b1_sep16_scaffold_6229

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_6229_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

2..616
DNA (615bp) protein (205aa)
Sensor protein KdpD Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3E5_ANATU
sensor protein KdpD
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_6229_2
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(588..1709)
DNA (1122bp) protein (374aa)
Putative chromate transporter Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CYQ2_MYXXD
chromate transporter
Putative chromate transporter {ECO:0000313|EMBL:ABF92831.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3-1_50_b1_sep16_scaffold_6229_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1810..3315)
DNA (1506bp) protein (502aa)
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component bin=GWC2_Chloroflexi_73_18 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_6229_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3312..4457)
DNA (1146bp) protein (382aa)
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIM0_CHLTF
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_6229_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4464..4793)
DNA (330bp) protein (110aa)
hypothetical protein bin=bin8_Chloro species=Streptomyces sulphureus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_6229_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

5001..5756
DNA (756bp) protein (252aa)
Putative transcriptional regulator ycf27 Tax=Nitrolancetus hollandicus Lb RepID=I4EKR3_9CHLR
two component transcriptional regulator, winged helix family
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_6229_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

6062..6667
DNA (606bp) protein (202aa)
Nicotinamidase-like amidase bin=GWC2_Chloroflexi_73_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
isochorismatase hydrolase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_6229_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

6646..7584
DNA (939bp) protein (313aa)
5'-3' exonuclease family protein bin=GWC2_Chloroflexi_73_18 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
5'-3' exonuclease
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_6229_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7598..8410)
DNA (813bp) protein (271aa)
Myo-inositol-1(Or 4)-monophosphatase bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
inositol monophosphatase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_6229_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8407..8886)
DNA (480bp) protein (160aa)
id=3491635 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_6229_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8923..10026)
DNA (1104bp) protein (368aa)
Luciferase family protein bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
methylthioadenosine phosphorylase
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying 11 items

View Taxonomy