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PLM3-1_50_b1_sep16_scaffold_257_21

Organism: PLM6_50_b1_sep16_Chloroflexi_RIF-CHLX_69_8

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 17738..18295

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 183.0
  • Bit_score: 193
  • Evalue 1.10e-46
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 169.0
  • Bit_score: 108
  • Evalue 1.30e-21
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 165.0
  • Bit_score: 201
  • Evalue 9.70e-49

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 558
ATGCAGCGAGACCTCGTGGAGCGAGCGCGGAGAGGTGATCATGACGCCTTCGCCGAGCTGGCCGGTGCCGCGATCTCCCGTCTAGATGGCGCTGCCTGGCTCATGCTCCGGGATGTCGAAGGGGCCAAGGACGCCGTCCAGAACGCGCTCGTCCGAGCCTGGCGCGACCTGCCGACGCTTCGCGACCCCGATAAGTTCGATGCCTGGGTGCATCGGTTGCTCGTTCACGCCTGCATCGATGAGGCGCGACGGACCCGCCGGCACCGCATGGACGTCGAGCTGACCGAACTCGATACACCATCGATCGCCGATCCGGGGTCGGCGATCGTCGACCGCGACCAACTCGAACGGGGCTTCCTCCGGCTCGAACCGGAGATGCGTGCCCTGATCGTCCTCCATCACTATCTCGACCTGCCATTGCCGACTGTCGCTACGACCCTGGGGATCCCCCTCGGGACGGCGAAGTCGCGGTTGCACCGTGCCCTCGGGCTGATGCGAGCGGCGCTCGACGCCGATGCCCGGGTCCGACCTGATCTCGCGGAGGGACGGCTGACATGA
PROTEIN sequence
Length: 186
MQRDLVERARRGDHDAFAELAGAAISRLDGAAWLMLRDVEGAKDAVQNALVRAWRDLPTLRDPDKFDAWVHRLLVHACIDEARRTRRHRMDVELTELDTPSIADPGSAIVDRDQLERGFLRLEPEMRALIVLHHYLDLPLPTVATTLGIPLGTAKSRLHRALGLMRAALDADARVRPDLAEGRLT*