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PLM3-1_50_b1_sep16_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_257_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2..388
DNA (387bp) protein (129aa)
adenylate cyclase (EC:4.6.1.1)
Alpha/beta hydrolase fold family hydrolase bin=GWC2_Chloroflexi_73_18 species=Mycobacterium colombiense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(393..992)
DNA (600bp) protein (200aa)
Phosphoglycerate mutase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7W6_ANADF
phosphoglycerate mutase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(989..1555)
DNA (567bp) protein (189aa)
LemA family protein bin=GWC2_Chloroflexi_73_18 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LemA protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1552..2355)
DNA (804bp) protein (268aa)
id=4786409 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

2617..3045
DNA (429bp) protein (143aa)
id=14629151 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3312..3833
DNA (522bp) protein (174aa)
Phospholipid/glycerol acyltransferase bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phospholipid/glycerol acyltransferase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3898..4263
DNA (366bp) protein (122aa)
id=4714448 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

4367..5107
DNA (741bp) protein (247aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Streptomyces mobaraensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
UbiA prenyltransferase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_9
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(5120..6172)
DNA (1053bp) protein (351aa)
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family bin=bin8_Chloro species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Chromosome segregation DNA-binding protein
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_257_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6132..6902)
DNA (771bp) protein (257aa)
ParA, ParA family ATPase bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cobyrinic acid a,c-diamide synthase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

7106..8650
DNA (1545bp) protein (515aa)
acyl-CoA carboxylase beta chain (EC:6.4.1.-)
Carboxyl transferase bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_257_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

8647..10248
DNA (1602bp) protein (534aa)
accA; acetyl-CoA carboxylase alpha subunit acca; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14] bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
acetyl-CoA carboxylase, biotin carboxylase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_257_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

10245..10739
DNA (495bp) protein (165aa)
biotin carboxyl carrier protein bin=bin8_Chloro species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin8_Chloro organism_group=Chloroflexi
pycA; pyruvate carboxylase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_257_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10736..12433
DNA (1698bp) protein (566aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] bin=bin8_Chloro species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Sbm5; methylmalonyl-CoA mutase N-terminal domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12529..13362
DNA (834bp) protein (278aa)
putative methylmalonyl-CoA epimerase (EC:5.1.99.1)
Putative methylmalonyl-CoA epimerase bin=GWC2_Chloroflexi_73_18 species=uncultured bacterium A1Q1_fos_2111 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_16
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13424..13744
DNA (321bp) protein (107aa)
UPF0145 protein B224_002539 Tax=Aeromonas media WS RepID=K2ITQ2_AERME
UPF0145 protein
UPF0145 protein B224_1538 {ECO:0000256|HAMAP-Rule:MF_00338}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
PLM3-1_50_b1_sep16_scaffold_257_17
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14163..15011)
DNA (849bp) protein (283aa)
Putative methyltransferase type 11 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R0K8_NOCCG
putative methyltransferase type 11
Putative methyltransferase type 11 {ECO:0000313|EMBL:CCF65477.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
PLM3-1_50_b1_sep16_scaffold_257_18
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15008..15481)
DNA (474bp) protein (158aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15502..16386)
DNA (885bp) protein (295aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
succinyl-CoA synthetase subunit alpha
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_257_20
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16383..17639)
DNA (1257bp) protein (419aa)
succinyl-CoA synthetase, beta subunit (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

17738..18295
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin8_Chloro organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_22
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

18292..19590
DNA (1299bp) protein (433aa)
Peptidase S41 Tax=Sphingobacterium sp. (strain 21) RepID=F4C778_SPHS2
peptidase S41
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_257_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

19721..20746
DNA (1026bp) protein (342aa)
isocitrate dehydrogenase (EC:1.1.1.41 1.1.1.42)
Isocitrate dehydrogenase (NADP) Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKR8_THEM7
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_257_24
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

20743..21558
DNA (816bp) protein (272aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_25
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

21790..23217
DNA (1428bp) protein (476aa)
Succinate dehydrogenase (EC:1.3.99.1)
Succinate dehydrogenase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDQ4_GEOOG
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_26
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

23214..24032
DNA (819bp) protein (273aa)
Succinate dehydrogenase subunit B bin=GWC2_Chloroflexi_73_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
fumarate reductase iron-sulfur subunit
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_27
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

24029..24517
DNA (489bp) protein (163aa)
bifunctional RNase H/acid phosphatase bin=bin8_Chloro species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
bifunctional RNase H/acid phosphatase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_257_28
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

24624..25586
DNA (963bp) protein (321aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Arthrobacter globiformis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PLM3-1_50_b1_sep16_scaffold_257_29
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

25693..26589
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Arthrobacter globiformis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PLM3-1_50_b1_sep16_scaffold_257_30
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(27068..27310)
DNA (243bp) protein (81aa)
id=14629169 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying items 1-30 of 47 in total

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