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PLM1_30_b1_sep16_scaffold_8817

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_8817_1
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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2..250
DNA (249bp) protein (83aa)
30S ribosomal protein S16 Tax=Microbacteriaceae RepID=UPI0003743B50
SSU ribosomal protein S16P
Tax=BJP_IG2102_Coriobacteriales_64_17
PLM1_30_b1_sep16_scaffold_8817_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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257..493
DNA (237bp) protein (79aa)
UPF0109 protein COCOR_04493 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGL6_CORCM
KH domain-containing protein
UPF0109 protein COCOR_04493 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM1_30_b1_sep16_scaffold_8817_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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496..1068
DNA (573bp) protein (191aa)
Ribosome maturation factor RimM Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB16_THECD
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_30_b1_sep16_scaffold_8817_4
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1075..1782
DNA (708bp) protein (236aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Frankia alni (strain ACN14a) RepID=TRMD_FRAAA
PLM1_30_b1_sep16_scaffold_8817_5
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1863..2219
DNA (357bp) protein (119aa)
50S ribosomal protein L19 Tax=Modestobacter marinus (strain BC501) RepID=I4F2D6_MODMB
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
rplS; 50S ribosomal protein L19
PLM1_30_b1_sep16_scaffold_8817_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2239..2829
DNA (591bp) protein (197aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Signal peptidase I Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB13_THECD
signal peptidase I
Displaying 6 items

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