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PLM1_30_b1_sep16_scaffold_287

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_287_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..382
DNA (381bp) protein (127aa)
HAD family hydrolase Tax=Curvibacter lanceolatus RepID=UPI000382E121
HAD family hydrolase {ECO:0000313|EMBL:KJC57058.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
HAD-superfamily hydrolase
PLM1_30_b1_sep16_scaffold_287_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(441..1634)
DNA (1194bp) protein (398aa)
Two component signal transduction histidine kinase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RVC6_BLASD
Two component signal transduction histidine kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_30_b1_sep16_scaffold_287_3
unknown

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comp(1732..1995)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_287_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1988..3238)
DNA (1251bp) protein (417aa)
phthalate 4,5-dioxygenase (EC:1.14.12.7)
Phthalate 4,5-dioxygenase {ECO:0000313|EMBL:AEA24722.1}; EC=1.14.12.7 {ECO:0000313|EMBL:AEA24722.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000362082F
PLM1_30_b1_sep16_scaffold_287_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3251..5068)
DNA (1818bp) protein (606aa)
Phosphoenolpyruvate synthase Tax=Bradyrhizobium sp. ORS 285 RepID=H0S3Z1_9BRAD
phosphoenolpyruvate synthase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM1_30_b1_sep16_scaffold_287_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(5097..6185)
DNA (1089bp) protein (363aa)
Putative phosphoenolpyruvate synthase Tax=Crassostrea gigas RepID=K1QX61_CRAGI
Putative phosphoenolpyruvate synthase {ECO:0000313|EMBL:EKC26106.1}; species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
pyruvate, water dikinase
PLM1_30_b1_sep16_scaffold_287_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6182..7237)
DNA (1056bp) protein (352aa)
Phosphoglycerate mutase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYB0_PSEUX
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:AEA24732.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_287_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7249..8160)
DNA (912bp) protein (304aa)
catechol 2,3 dioxygenase (EC:1.13.11.2)
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:AEA24731.1}; EC=1.13.11.2 {ECO:0000313|EMBL:AEA24731.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Catechol 2,3 dioxygenase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYA9_PSEUX
PLM1_30_b1_sep16_scaffold_287_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8162..9073)
DNA (912bp) protein (304aa)
catechol 2,3 dioxygenase (EC:1.13.11.2)
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:AEA24730.1}; EC=1.13.11.2 {ECO:0000313|EMBL:AEA24730.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
catechol 1,2-dioxygenase Tax=Actinomycetospora chiangmaiensis RepID=UPI00036850DF
PLM1_30_b1_sep16_scaffold_287_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9216..9872
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYA7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24729.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_287_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9869..10663
DNA (795bp) protein (265aa)
Transcriptional regulator, IclR family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYA6_PSEUX
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEA24728.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_287_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10660..11514
DNA (855bp) protein (285aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-oxopent-4-enoate hydratase {ECO:0000313|EMBL:AEA24727.1}; EC=4.2.1.80 {ECO:0000313|EMBL:AEA24727.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
2-hydroxypenta-2,4-dienoate hydratase Tax=Actinomycetospora chiangmaiensis RepID=UPI000380B281
PLM1_30_b1_sep16_scaffold_287_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11511..12434
DNA (924bp) protein (308aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Acetaldehyde dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3K7_THECD
PLM1_30_b1_sep16_scaffold_287_14
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12431..14254
DNA (1824bp) protein (608aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
4-hydroxy-2-oxovalerate aldolase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SI03_THEM7
4-hydroxy-2-oxovalerate aldolase
PLM1_30_b1_sep16_scaffold_287_15

Not on your lists

14274..14504
DNA (231bp) protein (77aa)
hypothetical protein Tax=Kocuria sp. UCD-OTCP RepID=UPI000375C534
Marine sediment metagenome DNA, contig: S06H3_C05330 {ECO:0000313|EMBL:GAI13934.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
4-oxalocrotonate tautomerase
PLM1_30_b1_sep16_scaffold_287_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14516..14890
DNA (375bp) protein (125aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=Burkholderia sp. Ch1-1 RepID=I2IRX5_9BURK
Rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_30_b1_sep16_scaffold_287_17
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14887..15546
DNA (660bp) protein (220aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6L1_MESOW
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:AEH85193.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
PLM1_30_b1_sep16_scaffold_287_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15952..16866
DNA (915bp) protein (305aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ACY96136.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACY96136.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Betaine-aldehyde dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3L1_THECD
PLM1_30_b1_sep16_scaffold_287_19
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17508..19031)
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002F0C2AB
Chemotaxis protein CheY {ECO:0000313|EMBL:KJH70724.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
thioredoxin reductase
Displaying 19 items

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