ggKbase home page

PLM1_30_b1_sep16_scaffold_459

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_459_1
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60..4343)
DNA (4284bp) protein (1428aa)
UvrABC system protein A Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y1V5_THEBD
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
excinuclease ABC subunit A
PLM1_30_b1_sep16_scaffold_459_2
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4556..5212
DNA (657bp) protein (219aa)
Metallo-beta-lactamase superfamily protein Tax=Saccharopolyspora erythraea RepID=A4FKI0_SACEN
metallo-beta-lactamase superfamily protein
Zn-dependent hydrolase {ECO:0000313|EMBL:EQD84229.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_30_b1_sep16_scaffold_459_3
unknown

Not on your lists

5209..5628
DNA (420bp) protein (140aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_459_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5625..6803)
DNA (1179bp) protein (393aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXH0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84903.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Two component signal transduction histidine kinase
PLM1_30_b1_sep16_scaffold_459_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6889..8763)
DNA (1875bp) protein (625aa)
Penicillin-binding protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FTA7_STIAD
Penicillin-binding protein {ECO:0000313|EMBL:KFA89274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
penicillin-binding protein
PLM1_30_b1_sep16_scaffold_459_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8797..10857)
DNA (2061bp) protein (687aa)
UvrABC system protein B Tax=Frankia sp. (strain CcI3) RepID=Q2JCJ0_FRASC
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
excinuclease ABC subunit B
PLM1_30_b1_sep16_scaffold_459_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11015..11101
DNA (87bp) protein (29aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Patulibacter americanus RepID=UPI0003B43950
Displaying 7 items

View Taxonomy