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PLM1_30_b1_sep16_scaffold_583

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_583_1
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..190)
DNA (189bp) protein (63aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI000378CF58
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma-70 factor, sigma-E family {ECO:0000313|EMBL:KJE25259.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
PLM1_30_b1_sep16_scaffold_583_2
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(231..758)
DNA (528bp) protein (176aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl-diphosphate Delta-isomerase; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
idi; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase Tax=Frankia sp. QA3 RepID=I8QYD3_9ACTO
PLM1_30_b1_sep16_scaffold_583_3
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(773..1867)
DNA (1095bp) protein (365aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000255|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000255|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000255|HAMAP-Rule:MF_00259}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Aminomethyltransferase Tax=Frankia alni (strain ACN14a) RepID=GCST_FRAAA
PLM1_30_b1_sep16_scaffold_583_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1864..2235)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N8L0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK32125.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_583_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2289..2753)
DNA (465bp) protein (155aa)
Putative signal transduction protein with CBS domains Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NY10_STRVO
CBS domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_583_6
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2863..4269
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
dihydrolipoamide dehydrogenase Tax=Streptomyces sp. KhCrAH-340 RepID=UPI00036F559B
dihydrolipoamide dehydrogenase
PLM1_30_b1_sep16_scaffold_583_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4300..6102
DNA (1803bp) protein (601aa)
Putative dihydrolipoamide S-succinyltransferase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWQ5_9ACTO
putative dihydrolipoamide S-succinyltransferase
Putative dihydrolipoamide S-succinyltransferase {ECO:0000313|EMBL:AGZ40140.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_30_b1_sep16_scaffold_583_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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6107..6820
DNA (714bp) protein (238aa)
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase; Octanoyltransferase (EC:2.3.1.181)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Octanoyltransferase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RS01_BLASD
PLM1_30_b1_sep16_scaffold_583_9
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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6813..7799
DNA (987bp) protein (329aa)
lipoic acid synthetase (EC:2.8.1.8)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
Lipoyl synthase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q8U2_STANL
PLM1_30_b1_sep16_scaffold_583_10
unknown

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7802..8383
DNA (582bp) protein (194aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_583_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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8489..9913
DNA (1425bp) protein (475aa)
Glutamine synthetase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4R2_STRRD
glutamine synthetase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 11 items

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