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PLM1_30_b1_sep16_scaffold_638

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_638_1
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..374
DNA (372bp) protein (124aa)
ABC transporter ATP-binding protein Tax=Kocuria sp. UCD-OTCP RepID=UPI000362EE05
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD97345.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
ABC transporter-like protein
PLM1_30_b1_sep16_scaffold_638_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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371..1231
DNA (861bp) protein (287aa)
Xylose isomerase domain-containing protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZV5_9ACTO
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:AGZ42419.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_30_b1_sep16_scaffold_638_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1244..2140
DNA (897bp) protein (299aa)
Myo-inosose-2 dehydratase (EC:4.2.1.44)
Myo-inosose-2 dehydratase {ECO:0000313|EMBL:ADB30785.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ADB30785.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Xylose isomerase domain-containing protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE019
PLM1_30_b1_sep16_scaffold_638_4
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2137..3141
DNA (1005bp) protein (335aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
Inositol 2-dehydrogenase Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZHI5_9ACTO
oxidoreductase domain-containing protein
PLM1_30_b1_sep16_scaffold_638_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3138..4112
DNA (975bp) protein (325aa)
hypothetical protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE207
Uncharacterized protein {ECO:0000313|EMBL:EXG82932.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_638_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4094..4546)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:CCH78965.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
PLM1_30_b1_sep16_scaffold_638_7
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4543..5616)
DNA (1074bp) protein (358aa)
LacI family transcription regulator Tax=Streptomyces rapamycinicus RepID=UPI00038309E4
LacI family transcription regulator
LacI family transcription regulator {ECO:0000313|EMBL:AGP61200.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_30_b1_sep16_scaffold_638_8
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5690..6868
DNA (1179bp) protein (393aa)
dehydrogenase Tax=Streptomyces prunicolor RepID=UPI000376EFD0
Dehydrogenase {ECO:0000313|EMBL:KDN77625.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
putative oxidoreductase
PLM1_30_b1_sep16_scaffold_638_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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6884..7882
DNA (999bp) protein (333aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI000371D6E1
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABK53584.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_638_10
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7900..8913
DNA (1014bp) protein (338aa)
Putative oxidoreductase Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V427_9ACTO
Oxidoreductase {ECO:0000313|EMBL:KDN77619.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
oxidoreductase
PLM1_30_b1_sep16_scaffold_638_11
unknown

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8931..9059
DNA (129bp) protein (43aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_638_12
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9070..10044)
DNA (975bp) protein (325aa)
oxidoreductase Tax=Streptomyces rapamycinicus RepID=UPI00038309E0
Oxidoreductase {ECO:0000313|EMBL:EXU65255.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
oxidoreductase
PLM1_30_b1_sep16_scaffold_638_13
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10054..10935)
DNA (882bp) protein (294aa)
myo-inosose-2 dehydratase (EC:4.2.1.44)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00036A1451
Inosose dehydratase {ECO:0000313|EMBL:EWT01635.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
PLM1_30_b1_sep16_scaffold_638_14
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10932..11936)
DNA (1005bp) protein (335aa)
dehydrogenase Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003619729
Dehydrogenase {ECO:0000313|EMBL:KKA37886.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
oxidoreductase
PLM1_30_b1_sep16_scaffold_638_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11955..12878)
DNA (924bp) protein (308aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003789414
Oxidoreductase {ECO:0000313|EMBL:EWT01632.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
D-3-phosphoglycerate dehydrogenase
PLM1_30_b1_sep16_scaffold_638_16
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12868..13230)
DNA (363bp) protein (121aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003603AB6
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EFL20583.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
xylose isomerase domain-containing protein
Displaying 16 items

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