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PLM1_30_b1_sep16_scaffold_673

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_673_1
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..226
DNA (225bp) protein (75aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
ribonuclease III Tax=Streptomyces sp. FxanaC1 RepID=UPI000373FAB0
ribonuclease III
PLM1_30_b1_sep16_scaffold_673_2
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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226..1074
DNA (849bp) protein (283aa)
DNA lyase Tax=Microbacterium maritypicum MF109 RepID=T5KP87_9MICO
DNA lyase {ECO:0000313|EMBL:EQM78522.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
DNA lyase
PLM1_30_b1_sep16_scaffold_673_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1179..2024
DNA (846bp) protein (282aa)
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Putative DNA-formamidopyrimidine glycosylase Tax=Candidatus Microthrix RepID=R4Z5W4_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_673_4
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2012..2818
DNA (807bp) protein (269aa)
hypothetical protein Tax=Nocardiopsis prasina RepID=UPI00035EA02D
Uncharacterized protein {ECO:0000313|EMBL:EYR62024.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_673_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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2821..3096
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin8_Chloro organism_group=Chloroflexi
acylphosphatase
Tax=CSP1_4_Chloroflexi
PLM1_30_b1_sep16_scaffold_673_6
unknown

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3384..3569
DNA (186bp) protein (62aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_673_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3710..7360
DNA (3651bp) protein (1217aa)
Chromosome partition protein Smc Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RWL8_BLASD
smc; Chromosome partition protein smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_30_b1_sep16_scaffold_673_8
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7365..8540
DNA (1176bp) protein (392aa)
cell division protein FtsY Tax=Streptomyces sp. CNS335 RepID=UPI000378BFD5
Cell division protein FtsY {ECO:0000313|EMBL:AKH85080.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
ftsY; signal recognition particle receptor
PLM1_30_b1_sep16_scaffold_673_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8872..9585
DNA (714bp) protein (238aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI000373CE04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY46606.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM1_30_b1_sep16_scaffold_673_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9453..10730)
DNA (1278bp) protein (426aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037B649B
Cysteine desulfurase {ECO:0000313|EMBL:ETK33785.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_673_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(10735..11706)
DNA (972bp) protein (324aa)
Putative oxidoreductase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N624_ANATU
putative oxidoreductase
Aldo/keto reductase {ECO:0000313|EMBL:ABU56221.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM1_30_b1_sep16_scaffold_673_12
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11760..13091
DNA (1332bp) protein (444aa)
Signal recognition particle protein Tax=Actinoplanes sp. N902-109 RepID=R4LYT7_9ACTO
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_30_b1_sep16_scaffold_673_13
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13189..13533
DNA (345bp) protein (115aa)
30S ribosomal protein S16 Tax=Youngiibacter fragilis 232.1 RepID=V7I9L3_9CLOT
SSU ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
PLM1_30_b1_sep16_scaffold_673_14
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13540..13776
DNA (237bp) protein (79aa)
UPF0109 protein ThesuDRAFT_00296 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYT6_9FIRM
RNA-binding protein
UPF0109 protein ThesuDRAFT_00296 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
PLM1_30_b1_sep16_scaffold_673_15
unknown

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13779..13847
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 15 items

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