ggKbase home page

PLM1_30_b1_sep16_scaffold_718

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_718_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..2445)
DNA (2445bp) protein (815aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J5J5_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81939.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_30_b1_sep16_scaffold_718_2
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2463..3188)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000361F3DB
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:KJE20431.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
ABC transporter
PLM1_30_b1_sep16_scaffold_718_3
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3185..3766)
DNA (582bp) protein (194aa)
Transcriptional regulator, PadR-like family Tax=Frankia sp. CN3 RepID=G6HKX0_9ACTO
Putative transcriptional regulator {ECO:0000313|EMBL:KJE20432.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
PadR family transcriptional regulator
PLM1_30_b1_sep16_scaffold_718_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3843..5015)
DNA (1173bp) protein (391aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003700C0B
histidine kinase
PLM1_30_b1_sep16_scaffold_718_5
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5012..5695)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00035CCA8F
winged helix family two component transcriptional regulator
Two-component regulator {ECO:0000313|EMBL:EMD24567.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
PLM1_30_b1_sep16_scaffold_718_6
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5834..6451
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0J4S8_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB26575.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM1_30_b1_sep16_scaffold_718_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6451..7113
DNA (663bp) protein (221aa)
Putative ABC transporter ATP-binding protein Tax=Rhodococcus RepID=C1BCU1_RHOOB
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH55685.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM1_30_b1_sep16_scaffold_718_8
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7110..7802
DNA (693bp) protein (231aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036B648E
ABC transporter
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGI66112.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
PLM1_30_b1_sep16_scaffold_718_9
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7790..9316
DNA (1527bp) protein (509aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003637E11
Putative membrane protein {ECO:0000313|EMBL:EID81396.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_718_10
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9469..10395
DNA (927bp) protein (309aa)
ABC transporter permease Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K560_STRRC
ABC transporter permease {ECO:0000313|EMBL:EST27320.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_718_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10392..11558
DNA (1167bp) protein (389aa)
40-residue YVTN family beta-propeller repeat protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VU5_SOLUE
YVTN beta-propeller repeat-containing protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ABJ86220.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM1_30_b1_sep16_scaffold_718_12
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11558..11998
DNA (441bp) protein (147aa)
ABC transporter Tax=Kribbella catacumbae RepID=UPI000371B84B
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB32569.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_30_b1_sep16_scaffold_718_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

11995..13665
DNA (1671bp) protein (557aa)
phosphoesterase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
phosphoesterase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM1_30_b1_sep16_scaffold_718_14
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

13662..14210
DNA (549bp) protein (183aa)
Phosphoesterase family protein (EC:3.1.3.-)
phosphoesterase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Displaying 14 items

View Taxonomy