ggKbase home page

PLM1_30_b1_sep16_scaffold_726

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_726_1
unknown

Not on your lists

1..372
DNA (372bp) protein (124aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_726_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

372..3617
DNA (3246bp) protein (1082aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbamoyl-phosphate synthase large chain Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZG6_PSEUX
PLM1_30_b1_sep16_scaffold_726_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3614..4444
DNA (831bp) protein (277aa)
dihydroorotate oxidase B, electron transfer subunit (EC:1.3.98.1)
Dihydroorotate oxidase B, electron transfer subunit {ECO:0000313|EMBL:ABK53069.1}; EC=1.3.98.1 {ECO:0000313|EMBL:ABK53069.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Dihydroorotate oxidase B, electron transfer subunit Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUF9_ACIC1
PLM1_30_b1_sep16_scaffold_726_4
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4441..5364
DNA (924bp) protein (308aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
dihydroorotate oxidase Tax=Frankia sp. Iso899 RepID=UPI0003B72D01
dihydroorotate dehydrogenase family protein
PLM1_30_b1_sep16_scaffold_726_5
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5451..6215
DNA (765bp) protein (255aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Orotidine 5'-phosphate decarboxylase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A829_THECD
PLM1_30_b1_sep16_scaffold_726_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6320..6637
DNA (318bp) protein (106aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI0003650D14
integration host factor-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_726_7
Synechococcus sp. WH 5701, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6702..7286
DNA (585bp) protein (195aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 5701.;"
Guanylate kinase Tax=Synechococcus sp. WH 5701 RepID=A3YY18_9SYNE
guanylate kinase
PLM1_30_b1_sep16_scaffold_726_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7286..7537
DNA (252bp) protein (84aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WSI4_PROPF
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_726_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7634..8815
DNA (1182bp) protein (394aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:ABK53063.1}; EC=4.1.1.36 {ECO:0000313|EMBL:ABK53063.1};; EC=6.3.2.5 {ECO:0000313|EMBL:ABK53063.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUF3_ACIC1
PLM1_30_b1_sep16_scaffold_726_10
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8907..9356
DNA (450bp) protein (150aa)
Microsomal epoxide hydrolase Tax=Amycolatopsis mediterranei RepID=D8I428_AMYMU
microsomal epoxide hydrolase
Microsomal epoxide hydrolase {ECO:0000313|EMBL:AEK41720.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_30_b1_sep16_scaffold_726_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9353..10057
DNA (705bp) protein (235aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000373549A
epoxide hydrolase domain-containing protein
Epoxide hydrolase domain protein {ECO:0000313|EMBL:ACQ78470.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM1_30_b1_sep16_scaffold_726_12
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10176..11369
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
S-adenosylmethionine synthase Tax=Actinomadura madurae LIID-AJ290 RepID=U2MES9_9ACTO
S-adenosylmethionine synthetase
PLM1_30_b1_sep16_scaffold_726_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11434..11859
DNA (426bp) protein (142aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
primosome assembly protein PriA Tax=Salinispora pacifica RepID=UPI0003662091
hypothetical protein
Displaying 13 items

View Taxonomy