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PLM1_30_b1_sep16_scaffold_732

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_732_1
unknown

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_732_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(220..1380)
DNA (1161bp) protein (387aa)
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
histidine kinase (EC:2.7.13.3)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM1_30_b1_sep16_scaffold_732_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(1373..2056)
DNA (684bp) protein (228aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
OmpR family two-component response regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM1_30_b1_sep16_scaffold_732_4
Prunus persica, Prunus, Rosales, rosids, Streptophyta, Viridiplantae

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comp(2159..2647)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Prunus persica RepID=M5VLC6_PRUPE
Uncharacterized protein {ECO:0000313|EMBL:EMJ01681.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus.;" source="Prunus persica (Peach) (Amygdalus persica).;"
PLM1_30_b1_sep16_scaffold_732_5
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2761..3357)
DNA (597bp) protein (199aa)
Cyclopropane fatty acid synthase/methyltransferase Tax=Amycolatopsis mediterranei RepID=D8HY70_AMYMU
Cyclopropane fatty acid synthase {ECO:0000313|EMBL:KDN16038.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
cyclopropane fatty acid synthase/methyltransferase
PLM1_30_b1_sep16_scaffold_732_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3488..4270
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YUK0_9PSEU
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:ETK33738.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Hypothetical protein
PLM1_30_b1_sep16_scaffold_732_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4345..5301
DNA (957bp) protein (319aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2T5_KRIFD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB30266.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_30_b1_sep16_scaffold_732_8
CG_CPR15_01, CG_CPR15, Bacteria

Not on your lists

comp(5310..6206)
DNA (897bp) protein (299aa)
GCN5-related N-acetyltransferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRN4_9CHLR
hypothetical protein
Tax=CG_CPR15_01
PLM1_30_b1_sep16_scaffold_732_9
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6362..7120
DNA (759bp) protein (253aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003642AEA
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AJF65582.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_30_b1_sep16_scaffold_732_10
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

comp(7033..10932)
DNA (3900bp) protein (1300aa)
ribonucleoside diphosphate reductase, B12-dependent (EC:1.17.4.1)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000366CE77
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
PLM1_30_b1_sep16_scaffold_732_11
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

11209..11706
DNA (498bp) protein (166aa)
Transcriptional repressor NrdR Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LY15_ACIFD
ATP-cone domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
PLM1_30_b1_sep16_scaffold_732_12
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11833..12099)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Microbacterium sp. 292MF RepID=UPI00037DA2BF
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:KGM12132.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
LysM domain-containing protein
PLM1_30_b1_sep16_scaffold_732_13
unknown

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12136..12249
DNA (114bp) protein (38aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_732_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12298..12930
DNA (633bp) protein (211aa)
LexA family transcriptional regulator (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
LexA repressor Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDC2_GEOOG
PLM1_30_b1_sep16_scaffold_732_15
unknown

Not on your lists

13419..13583
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 15 items

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