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PLM1_30_b1_sep16_scaffold_2183

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_2183_1
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..594
DNA (594bp) protein (198aa)
Periplasmic binding protein/LacI transcriptional regulator Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGD7_ACTMD
LacI family transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACU39901.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_30_b1_sep16_scaffold_2183_2
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(678..1826)
DNA (1149bp) protein (383aa)
Epoxide hydrolase domain-containing protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SUY3_AMYOR
epoxide hydrolase
Epoxide hydrolase {ECO:0000313|EMBL:AJK57335.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM1_30_b1_sep16_scaffold_2183_3
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1924..2886
DNA (963bp) protein (321aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003638920
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KFZ77276.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
DeoR family transcriptional regulator
PLM1_30_b1_sep16_scaffold_2183_4
unknown

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2975..3154
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2183_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3185..3904)
DNA (720bp) protein (240aa)
ABC-2 type transporter Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJX8_CATAD
ABC transporter permease
ABC-2 type transporter {ECO:0000313|EMBL:ACU73216.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_30_b1_sep16_scaffold_2183_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3907..4881)
DNA (975bp) protein (325aa)
ABC transporter related Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJX9_CATAD
ABC transporter ATPase
ABC transporter related {ECO:0000313|EMBL:ACU73217.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_30_b1_sep16_scaffold_2183_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5039..5305)
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Rhodococcus ruber BKS 20-38 RepID=M2Y875_9NOCA
Membrane protein {ECO:0000313|EMBL:EYR64053.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_2183_8

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comp(5749..6630)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI00036494F8
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48876.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Alpha/beta hydrolase fold protein
PLM1_30_b1_sep16_scaffold_2183_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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6796..9669
DNA (2874bp) protein (958aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035ECA91
LuxR family transcriptional regulator
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_30_b1_sep16_scaffold_2183_10
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9762..9953
DNA (192bp) protein (64aa)
hypothetical protein Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI000377CEA4
DUF1254 multi-domain protein
Uncharacterized protein {ECO:0000313|EMBL:AGK76895.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
PLM1_30_b1_sep16_scaffold_2183_11
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9950..11371
DNA (1422bp) protein (474aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000373897A
Oxidoreductase {ECO:0000313|EMBL:KJK34389.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
oxidoreductase
PLM1_30_b1_sep16_scaffold_2183_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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11378..11800
DNA (423bp) protein (141aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00037BDA70
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK31243.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM1_30_b1_sep16_scaffold_2183_13
unknown

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comp(11755..12435)
DNA (681bp) protein (227aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2183_14
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12448..12732)
DNA (285bp) protein (95aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037FA952
Putative uncharacterized protein {ECO:0000313|EMBL:EEX09595.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_2183_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(12729..15221)
DNA (2493bp) protein (831aa)
Adenylate/guanylate cyclase bin=GWC2_Chloroflexi_73_18 species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
adenylate/guanylate cyclase
Tax=GWC2_RIF_CHLX_73_18_curated
Displaying 15 items

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