ggKbase home page

PLM1_30_b1_sep16_scaffold_2233

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_2233_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

447..800
DNA (354bp) protein (118aa)
chemotaxis protein CheY Tax=Hoeflea sp. 108 RepID=UPI0003732100
two component transcriptional regulator, winged helix family
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_30_b1_sep16_scaffold_2233_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1218..1346
DNA (129bp) protein (43aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_2233_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1432..1710
DNA (279bp) protein (93aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKW9_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA23962.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_30_b1_sep16_scaffold_2233_4
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1745..2575
DNA (831bp) protein (277aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00036DCB1F
Uncharacterized protein {ECO:0000313|EMBL:EWT02019.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_2233_5
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2609..2836
DNA (228bp) protein (76aa)
hypothetical protein Tax=Leptospira santarosai RepID=UPI00037DF093
Uncharacterized protein {ECO:0000313|EMBL:EMM71407.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii str. 2006001855.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_2233_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3592..4986
DNA (1395bp) protein (465aa)
metallopeptidase Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003793282
Metallopeptidase {ECO:0000313|EMBL:ETK36400.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
metallopeptidase
PLM1_30_b1_sep16_scaffold_2233_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5377..5598
DNA (222bp) protein (74aa)
Transposase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NY79_AROAE
tnp50; transposase
Transposase {ECO:0000313|EMBL:CAI09985.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM1_30_b1_sep16_scaffold_2233_8
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5714..5842
DNA (129bp) protein (43aa)
Transposase IS116/IS110/IS902 family protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBJ7_INTC7
transposase IS116/IS110/IS902 family protein
Transposase {ECO:0000313|EMBL:KDE12973.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
Displaying 8 items

View Taxonomy