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PLM1_30_b1_sep16_scaffold_2652

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_2652_1
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1157)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035CC3F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH33394.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_30_b1_sep16_scaffold_2652_2
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(1154..1279)
DNA (126bp) protein (42aa)
Uncharacterized protein Tax=Ferroplasma acidarmanus fer1 RepID=S0ARH6_FERAC
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM1_30_b1_sep16_scaffold_2652_3
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1276..2151)
DNA (876bp) protein (292aa)
Xaa-Pro dipeptidase Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WKU1_9NOCA
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EKP93815.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
Peptidase M24
PLM1_30_b1_sep16_scaffold_2652_4
Actinomyces sp. oral taxon 170, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2245..3810)
DNA (1566bp) protein (522aa)
3-dehydroquinate synthase Tax=Actinomyces sp. oral taxon 170 str. F0386 RepID=F3PAQ4_9ACTO
3-dehydroquinate synthase {ECO:0000313|EMBL:EGF53472.1}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 170 str. F0386.;"
3-dehydroquinate synthase
PLM1_30_b1_sep16_scaffold_2652_5
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3807..4352)
DNA (546bp) protein (182aa)
Shikimate kinase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=AROK_SYMTH
shikimate kinase
Tax=CG_Delta_02
PLM1_30_b1_sep16_scaffold_2652_6
unknown

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4503..4808
DNA (306bp) protein (102aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2652_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4760..5962)
DNA (1203bp) protein (401aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Chorismate synthase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7X3_THECD
PLM1_30_b1_sep16_scaffold_2652_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5990..7018)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000365D583
Uncharacterized protein {ECO:0000313|EMBL:EAR25715.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_2652_9
unknown

Not on your lists

comp(7394..7999)
DNA (606bp) protein (202aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2652_10
unknown

Not on your lists

comp(7996..8265)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2652_11
unknown

Not on your lists

comp(8262..9182)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003825FBE
PLM1_30_b1_sep16_scaffold_2652_12
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

Not on your lists

comp(9225..9836)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Polysphondylium pallidum RepID=D3B248_POLPA
Uncharacterized protein {ECO:0000313|EMBL:EFA84423.1}; species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;"
PLM1_30_b1_sep16_scaffold_2652_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9845..10525)
DNA (681bp) protein (227aa)
Tfp pilus assembly protein PilO-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW03_RUBXD
Tfp pilus assembly protein PilO-like protein
Tfp pilus assembly protein PilO-like protein {ECO:0000313|EMBL:ABG04425.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_30_b1_sep16_scaffold_2652_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10522..11262)
DNA (741bp) protein (247aa)
Type IV pilus assembly protein PilM bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_2652_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11263..12306)
DNA (1044bp) protein (348aa)
Type IV pilus assembly protein PilM Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUH5_ACIC1
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:ABK53085.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_2652_16
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12425..13222)
DNA (798bp) protein (266aa)
Putative prepilin peptidase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZD5_ACTM4
putative prepilin peptidase
Putative prepilin peptidase {ECO:0000313|EMBL:BAL86122.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_30_b1_sep16_scaffold_2652_17
unknown

Not on your lists

comp(13287..13460)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2652_18
unknown

Not on your lists

13593..13733
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_2652_19
Yersinia phage Yepe2, T7likevirus, Caudovirales, Viruses

Not on your lists

comp(13788..14558)
DNA (771bp) protein (257aa)
Endonuclease VII Tax=Yersinia phage YpP-G RepID=I6Q9Z6_9CAUD
Endonuclease VII {ECO:0000313|EMBL:AFK13461.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae; Autographivirinae; T7likevirus.;" source="Yersinia phage YpP-G.;"
endonuclease VII
PLM1_30_b1_sep16_scaffold_2652_20
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14659..15876)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036070A9
Pilus assembly protein PilC {ECO:0000313|EMBL:EYR64428.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
type II secretion system protein
PLM1_30_b1_sep16_scaffold_2652_21
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15892..17034)
DNA (1143bp) protein (381aa)
Twitching motility protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUI3_ACIC1
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ABK53093.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_30_b1_sep16_scaffold_2652_22
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(17118..18332)
DNA (1215bp) protein (405aa)
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] bin=bin9_gal15 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
adenosylhomocysteinase (EC:3.3.1.1)
Tax=CSP1_3_Armatimonadetes
PLM1_30_b1_sep16_scaffold_2652_23
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18356..18685)
DNA (330bp) protein (110aa)
Transcriptional regulator, MerR family Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AF42_THECD
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACY99586.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_30_b1_sep16_scaffold_2652_24
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

18758..19801
DNA (1044bp) protein (348aa)
ABC transporter related Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWT9_RUBXD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABG04139.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_30_b1_sep16_scaffold_2652_25
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19881..21185
DNA (1305bp) protein (435aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036F429E
protoporphyrinogen oxidase-like protein
Protoporphyrinogen oxidase-like protein {ECO:0000313|EMBL:ACZ90792.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Displaying 25 items

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