ggKbase home page

PLM1_30_b1_sep16_scaffold_1373

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_1373_1
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..187
DNA (186bp) protein (62aa)
Sigma factor Tax=Streptomyces collinus Tu 365 RepID=S5UMD4_STRCU
sigma factor
Sigma factor {ECO:0000313|EMBL:AGS66941.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM1_30_b1_sep16_scaffold_1373_2
unknown

Not on your lists

184..1395
DNA (1212bp) protein (404aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_1373_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1434..2981
DNA (1548bp) protein (516aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ADU51503.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ADU51503.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Propionyl-CoA carboxylase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML1_THEM7
PLM1_30_b1_sep16_scaffold_1373_4
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2978..4693
DNA (1716bp) protein (572aa)
Carbamoyl-phosphate synthase L chain ATP-binding Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LY72_ACIFD
carbamoyl-phosphate synthase L chain ATP-binding
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ACU53680.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
PLM1_30_b1_sep16_scaffold_1373_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4727..5140
DNA (414bp) protein (138aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003675BE7
Anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ETK32701.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
anti-sigma regulatory factor, serine/threonine protein kinase
PLM1_30_b1_sep16_scaffold_1373_6
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5137..5910)
DNA (774bp) protein (258aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI0003683E21
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKH84464.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
PLM1_30_b1_sep16_scaffold_1373_7
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5960..6928)
DNA (969bp) protein (323aa)
UDP-glucose 4-epimerase Tax=Dietzia alimentaria RepID=UPI00029A8CB0
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EME20404.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
NAD-dependent epimerase/dehydratase
PLM1_30_b1_sep16_scaffold_1373_8
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7146..8639
DNA (1494bp) protein (498aa)
Protein serine/threonine phosphatase Tax=Frankia sp. CN3 RepID=G6HGJ0_9ACTO
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:CAJ59038.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_30_b1_sep16_scaffold_1373_9
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8700..9848
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase Tax=Streptomyces sp. AA0539 RepID=UPI0002D9EB99
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKG45178.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
acyl-CoA dehydrogenase domain-containing protein
PLM1_30_b1_sep16_scaffold_1373_10
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10049..11386)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036B8883
putative HNH endonuclease
Putative HNH endonuclease {ECO:0000313|EMBL:BAL91826.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_30_b1_sep16_scaffold_1373_11
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

11543..11794
DNA (252bp) protein (84aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI0002D73CDD
RNA polymerase sigma factor SigW-like protein
Tax=RBG_16_Chloroflexi_64_32_curated
Displaying 11 items

View Taxonomy