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PLM1_30_b1_sep16_scaffold_1798

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_1798_1
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..366
DNA (366bp) protein (122aa)
Transcriptional regulator, XRE family protein Tax=Acetonema longum DSM 6540 RepID=F7NPE8_9FIRM
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:EGO62110.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
transcriptional regulator
PLM1_30_b1_sep16_scaffold_1798_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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392..892
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6C3_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83836.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_30_b1_sep16_scaffold_1798_3
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

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902..2326
DNA (1425bp) protein (475aa)
inosine monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase bin=GWA2_Elusimicrobia_66_18 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
PLM1_30_b1_sep16_scaffold_1798_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2336..3715
DNA (1380bp) protein (460aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000362A1DF
ribosomal protein S12 methylthiotransferase
PLM1_30_b1_sep16_scaffold_1798_5
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3752..5002
DNA (1251bp) protein (417aa)
CinA-like protein Tax=Frankia alni (strain ACN14a) RepID=Q0RDV2_FRAAA
competence-inducible (CinA-like) protein
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_30_b1_sep16_scaffold_1798_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4999..5637
DNA (639bp) protein (213aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
2'-5' RNA ligase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGJ3_ANASK
2'-5' RNA ligase
PLM1_30_b1_sep16_scaffold_1798_7
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5621..6298)
DNA (678bp) protein (226aa)
Putative membrane protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JZY6_SACES
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCH30234.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Displaying 7 items

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