ggKbase home page

PLM1_30_b1_sep16_scaffold_4282

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_4282_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(133..981)
DNA (849bp) protein (283aa)
Xylose isomerase domain protein TIM barrel Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9R9_THEBD
xylose isomerase domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_4282_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1086..1775
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ELP2_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_4282_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1772..2020
DNA (249bp) protein (83aa)
Glutaredoxin 2 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X50_SOLUE
trxA8; thioredoxin
Thioredoxin {ECO:0000313|EMBL:EMA16459.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;"
PLM1_30_b1_sep16_scaffold_4282_4
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2077..2793
DNA (717bp) protein (239aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000378422B
REX family transcriptional regulator
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cyaneogriseus subsp. noncyanogenus.;"
PLM1_30_b1_sep16_scaffold_4282_5
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4093..4998
DNA (906bp) protein (302aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5US29_9MICO
PLM1_30_b1_sep16_scaffold_4282_6
Selenomonas sp. FOBRC9, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4995..5852
DNA (858bp) protein (286aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EJP31216.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EJP31216.1};; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. FOBRC9.;"
hemD; uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase Tax=Selenomonas sp. FOBRC9 RepID=J4KEB2_9FIRM
PLM1_30_b1_sep16_scaffold_4282_7
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5902..6909
DNA (1008bp) protein (336aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
delta-aminolevulinic acid dehydratase Tax=Nocardiopsis ganjiahuensis RepID=UPI00034B51BF
PLM1_30_b1_sep16_scaffold_4282_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6923..7948
DNA (1026bp) protein (342aa)
Putative esterase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP15_9CHLR
Putative esterase {ECO:0000313|EMBL:EFH85551.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
enterochelin esterase and related enzyme
PLM1_30_b1_sep16_scaffold_4282_9
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7953..8303
DNA (351bp) protein (117aa)
haloacid dehalogenase Tax=Salinispora pacifica RepID=UPI000381D1E6
Haloacid dehalogenase {ECO:0000313|EMBL:KJS55809.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
putative phosphatase YieH
Displaying 9 items

View Taxonomy