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PLM1_30_b1_sep16_scaffold_4510

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_4510_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1..1110
DNA (1110bp) protein (370aa)
ald; alanine dehydrogenase (EC:1.4.1.1)
alanine dehydrogenase Tax=Salinispora pacifica RepID=UPI00035D3340
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_4510_2
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1113..2138
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00036870C0
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_4510_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2250..2606
DNA (357bp) protein (119aa)
DNA-binding protein Tax=Serinicoccus profundi RepID=UPI000255F7BE
TraR/DksA family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_4510_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2603..3841
DNA (1239bp) protein (413aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
DeoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R927_9THEO
PLM1_30_b1_sep16_scaffold_4510_5
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4120..4881
DNA (762bp) protein (254aa)
Chromosome partitioning protein ParA Tax=Amycolatopsis mediterranei RepID=D8HN69_AMYMU
parA; chromosome partitioning protein ParA
Chromosome partitioning protein ParA {ECO:0000313|EMBL:EOD64566.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
PLM1_30_b1_sep16_scaffold_4510_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4878..5225
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJL3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81998.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_30_b1_sep16_scaffold_4510_7
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5222..6547
DNA (1326bp) protein (442aa)
Pyrimidine-nucleoside phosphorylase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NY19_9FIRM
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EKP93770.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
pyrimidine-nucleoside phosphorylase
PLM1_30_b1_sep16_scaffold_4510_8
R_RIF_OD1_01_42_19, RIF-OD1-1, Parcubacteria, Bacteria

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6625..7161
DNA (537bp) protein (179aa)
Peptidase M50 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT82_DESRL
peptidase M50
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_01_42_19_curated
PLM1_30_b1_sep16_scaffold_4510_9
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7408..8178
DNA (771bp) protein (257aa)
Condensin subunit ScpA Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZG2_SACVD
condensin subunit ScpA
Condensin subunit ScpA {ECO:0000313|EMBL:ACU97529.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM1_30_b1_sep16_scaffold_4510_10
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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8175..8951
DNA (777bp) protein (259aa)
Chromosome segregation and condensation protein, ScpB Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YA66_THEBD
chromosome segregation and condensation protein ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_30_b1_sep16_scaffold_4510_11
unknown

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comp(8886..9671)
DNA (786bp) protein (262aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_4510_12
Heliobacillus mobilis, Heliobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9884..10543
DNA (660bp) protein (220aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Fragment;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacillus.;" source="Heliobacillus mobilis.;"
pseudouridine synthase (EC:5.4.99.12)
Pseudouridine synthase (Fragment) Tax=Heliobacillus mobilis RepID=Q8GDU7_HELMO
PLM1_30_b1_sep16_scaffold_4510_13
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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10616..11044
DNA (429bp) protein (143aa)
Chorismate mutase Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZX3_ACIFD
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:ACU54281.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
PLM1_30_b1_sep16_scaffold_4510_14
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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11097..11741
DNA (645bp) protein (215aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIU3_MOOTA
Tax=RBG_16_Actinobacteria_64_13_curated
Displaying 14 items

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