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PLM1_30_b1_sep16_scaffold_3421

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_3421_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..436)
DNA (435bp) protein (145aa)
60 kDa chaperonin Tax=Nocardioides sp. CF8 RepID=R7Y0Y2_9ACTO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
chaperonin GroEL
PLM1_30_b1_sep16_scaffold_3421_2
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(455..748)
DNA (294bp) protein (98aa)
10 kDa chaperonin Tax=Kineosphaera limosa NBRC 100340 RepID=K6WB35_9MICO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
10 kDa chaperonin
PLM1_30_b1_sep16_scaffold_3421_3
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(875..1531)
DNA (657bp) protein (219aa)
DNA-binding protein Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZF8_9ACTO
DNA-binding protein {ECO:0000313|EMBL:EGD41507.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
TetR family transcriptional regulator
PLM1_30_b1_sep16_scaffold_3421_4
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1594..2010
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZF9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGN31436.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
PLM1_30_b1_sep16_scaffold_3421_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2007..3047)
DNA (1041bp) protein (347aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=TSAD_ACIC1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3421_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3050..3616)
DNA (567bp) protein (189aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZY47_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3421_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3613..4359)
DNA (747bp) protein (249aa)
Peptidase M22 family protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZX16_9ACTN
peptidase M22 family protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_30_b1_sep16_scaffold_3421_8
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4456..5298
DNA (843bp) protein (281aa)
diguanylate cyclase Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B3F6FA
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACV67966.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
Displaying 8 items

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