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PLM1_30_b1_sep16_scaffold_3588

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_30_b1_sep16_scaffold_3588_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..210)
DNA (210bp) protein (70aa)
sugar ABC transporter ATP-binding protein Tax=Longispora albida RepID=UPI000372FA04
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADP85007.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_30_b1_sep16_scaffold_3588_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(284..1384)
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8S9M6_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL48939.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_30_b1_sep16_scaffold_3588_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1377..2879)
DNA (1503bp) protein (501aa)
Xylulokinase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8L3_GEOOG
xylulokinase
Xylulokinase {ECO:0000313|EMBL:ADB75594.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_30_b1_sep16_scaffold_3588_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2876..4051)
DNA (1176bp) protein (392aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Xylose isomerase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWM6_ACIC1
PLM1_30_b1_sep16_scaffold_3588_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4206..5231
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI000362AA3B
ROK family protein
ROK family protein {ECO:0000313|EMBL:ACZ83384.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_30_b1_sep16_scaffold_3588_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5241..6959
DNA (1719bp) protein (573aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZQ0_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03128.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_30_b1_sep16_scaffold_3588_7
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6963..7793
DNA (831bp) protein (277aa)
Fe-S protein Tax=Amycolatopsis methanolica RepID=UPI00037959E2
Fe-S protein-like protein
Fe-S protein-like protein {ECO:0000313|EMBL:AIJ25840.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_30_b1_sep16_scaffold_3588_8
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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7790..9229
DNA (1440bp) protein (480aa)
hypothetical protein Tax=Streptomyces sp. MspMP-M5 RepID=UPI00035E336F
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM1_30_b1_sep16_scaffold_3588_9
Streptomyces sp. SANK 61196, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9220..9657)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037FE803
Monooxygenase {ECO:0000313|EMBL:ADG86320.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SANK 61196.;"
sterol-binding domain-containing protein
PLM1_30_b1_sep16_scaffold_3588_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9762..10070)
DNA (309bp) protein (103aa)
TAP domain protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1Q1_KRIFD
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:ADB32040.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_30_b1_sep16_scaffold_3588_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10358..10855)
DNA (498bp) protein (166aa)
TAP domain protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1Q1_KRIFD
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:ADB32040.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_30_b1_sep16_scaffold_3588_12
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10860..11849)
DNA (990bp) protein (330aa)
Fructose-1,6-bisphosphatase Tax=Streptomyces albulus CCRC 11814 RepID=S0HCW6_STRA9
fructose 1,6-bisphosphatase II
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM1_30_b1_sep16_scaffold_3588_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

12000..12989
DNA (990bp) protein (330aa)
Cation diffusion facilitator family transporter Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U537_9CHLR
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFH81617.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Cation-efflux pump fieF
PLM1_30_b1_sep16_scaffold_3588_14
unknown

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comp(12974..13423)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM1_30_b1_sep16_scaffold_3588_15
unknown

Not on your lists

comp(13420..13698)
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 15 items

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